RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 CNGA1P29973 690 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 SSRP1Q08945 709 aaKnown RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 UBE2SQ16763 222 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 FBXO16Q8IX29 292 aaPredicted RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 ZNF713Q8N859 430 aaPredicted RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 IL31RAQ8NI17 732 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 NSUN6Q8TEA1 469 aaKnown RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 LENG1Q96BZ8 264 aaPredicted RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 CRISPLD2Q9H0B8 497 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 ABHD16BQ9H3Z7 469 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 ZHX1Q9UKY1 873 aaPredicted RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 LOC102724159A0A0B4J2E5 919 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 SGPL1O95470 568 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 FDPSP14324 419 aaKnown RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 PWP2Q15269 919 aaKnown RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 ANO1Q5XXA6 986 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 TRIM22Q8IYM9 498 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 NSUN7Q8NE18 718 aaKnown RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 RIC8AQ9NPQ8 531 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 PDGFCQ9NRA1 345 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 VPS54Q9P1Q0 977 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 DDX20Q9UHI6 824 aaKnown RBP16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 FRMPD4Q14CM0 1322 aa16.55■□□□□ 0.24
SRGAP3-208ENST00000490348 SMCO2A6NFE2 343 aa16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 JAK2O60674 1132 aa16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 PTGS1P23219 599 aa16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 AKAP17AQ02040 695 aaKnown RBP16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 CCDC144BQ3MJ40 725 aa16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 ARHGEF16Q5VV41 709 aa16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 PDCD2LQ9BRP1 358 aa16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 ZMYND12Q9H0C1 365 aa16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 STK36Q9NRP7 1315 aa16.54■□□□□ 0.24
SRGAP3-208ENST00000490348 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 ST18O60284 1047 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 CDKL5O76039 1030 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 DEXIO95424 95 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 CLK2P49760 499 aaKnown RBP16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 MNX1P50219 401 aaPredicted RBP16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 ADCY7P51828 1080 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 PGM5Q15124 567 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 CCDC83Q8IWF9 413 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 SMARCC2Q8TAQ2 1214 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 CUL5Q93034 780 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 IWS1Q96ST2 819 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 OGDHLQ9ULD0 1010 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 FRMPD3Q5JV73 1810 aa16.53■□□□□ 0.24
SRGAP3-208ENST00000490348 ESYT2A0FGR8 921 aa16.52■□□□□ 0.24
SRGAP3-208ENST00000490348 RGS20O76081 388 aa16.52■□□□□ 0.24
SRGAP3-208ENST00000490348 NR3C2P08235 984 aa16.52■□□□□ 0.24
SRGAP3-208ENST00000490348 AKR1A1P14550 325 aa16.52■□□□□ 0.24
SRGAP3-208ENST00000490348 ADCYAP1R1P41586 468 aa16.52■□□□□ 0.24
SRGAP3-208ENST00000490348 PDE4DQ08499 809 aa16.52■□□□□ 0.24
SRGAP3-208ENST00000490348 VTA1Q9NP79 307 aa16.52■□□□□ 0.24
SRGAP3-208ENST00000490348 GJB4Q9NTQ9 266 aa16.52■□□□□ 0.24
SRGAP3-208ENST00000490348 MRPL12P52815 198 aaKnown RBP16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 NPY5RQ15761 445 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 VSIG10LQ86VR7 867 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 ZSCAN31Q96LW9 406 aaPredicted RBP16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 SH2B1Q9NRF2 756 aaPredicted RBP16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 TMEM260Q9NX78 707 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 ORC3Q9UBD5 711 aaPredicted RBP16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 FAM184BQ9ULE4 1060 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 RBM47A0AV96 593 aaKnown RBP16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 MSCO60682 206 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 TFRCP02786 760 aaKnown RBP16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 SMPD1P17405 629 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 MRPS9P82933 396 aaKnown RBP16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 IL27Q8NEV9 243 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 TMX3Q96JJ7 454 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 SH3GLB2Q9NR46 395 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 PCDHA6Q9UN73 950 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 PCDHA8Q9Y5H6 950 aa16.51■□□□□ 0.23
SRGAP3-208ENST00000490348 ARIH2O95376 493 aa16.5■□□□□ 0.23
SRGAP3-208ENST00000490348 IRX5P78411 483 aaPredicted RBP16.5■□□□□ 0.23
SRGAP3-208ENST00000490348 STXBP2Q15833 593 aa16.5■□□□□ 0.23
SRGAP3-208ENST00000490348 GJC2Q5T442 439 aaPredicted RBP16.5■□□□□ 0.23
SRGAP3-208ENST00000490348 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
SRGAP3-208ENST00000490348 GNEQ9Y223 722 aaKnown RBP16.5■□□□□ 0.23
SRGAP3-208ENST00000490348 EIF3JO75822 258 aaKnown RBP16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 PGK1P00558 417 aa16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 RARBP10826 455 aa16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 MYCLP12524 364 aaPredicted RBP16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 TEX2Q8IWB9 1127 aa16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 CCDC148Q8NFR7 591 aa16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 RASGRP4Q8TDF6 673 aa16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 DIS3LQ8TF46 1054 aaKnown RBP16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 KCNJ14Q9UNX9 436 aa16.49■□□□□ 0.23
SRGAP3-208ENST00000490348 SYNRGQ9UMZ2 1314 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms