RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 CCDC85BQ15834 202 aaPredicted RBP13.81□□□□□ -0.2
FDPS-215ENST00000490140 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
FDPS-215ENST00000490140 IQCA1Q86XH1 822 aa13.81□□□□□ -0.2
FDPS-215ENST00000490140 RGS22Q8NE09 1264 aa13.81□□□□□ -0.2
FDPS-215ENST00000490140 SCLYQ96I15 445 aa13.81□□□□□ -0.2
FDPS-215ENST00000490140 UHRF1Q96T88 793 aaPredicted RBP13.81□□□□□ -0.2
FDPS-215ENST00000490140 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
FDPS-215ENST00000490140 A6NJR5 290 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 HSPD1P10809 573 aaKnown RBP13.8□□□□□ -0.2
FDPS-215ENST00000490140 CYP2C9P11712 490 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 KCNJ6P48051 423 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 AAMPQ13685 434 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 NBPF20Q3BBV1 942 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 TTBK2Q6IQ55 1244 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 DEFB128Q7Z7B8 93 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 MCF2L2Q86YR7 1114 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 CAGE1Q8TC20 777 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 FTOQ9C0B1 505 aaKnown RBP eCLIP13.8□□□□□ -0.2
FDPS-215ENST00000490140 INCENPQ9NQS7 918 aa13.8□□□□□ -0.2
FDPS-215ENST00000490140 DDX49Q9Y6V7 483 aaKnown RBP13.8□□□□□ -0.2
FDPS-215ENST00000490140 A0A0D9SFI3 127 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 SNHG28P0DPA3 235 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 RABGGTBP53611 331 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 SKIV2LQ15477 1246 aaKnown RBP13.79□□□□□ -0.2
FDPS-215ENST00000490140 DGKHQ86XP1 1220 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 NSUN6Q8TEA1 469 aaKnown RBP13.79□□□□□ -0.2
FDPS-215ENST00000490140 AFAP1L1Q8TED9 768 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 CLEC4DQ8WXI8 215 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 PURBQ96QR8 312 aaKnown RBP13.79□□□□□ -0.2
FDPS-215ENST00000490140 KATNAL1Q9BW62 490 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 ABCB11O95342 1321 aa13.79□□□□□ -0.2
FDPS-215ENST00000490140 HIP1O00291 1037 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 ZNF213O14771 459 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 GH1P01241 217 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 CA3P07451 260 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
FDPS-215ENST00000490140 HDAC1Q13547 482 aaPredicted RBP13.78□□□□□ -0.2
FDPS-215ENST00000490140 USH1GQ495M9 461 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 ASPRV1Q53RT3 343 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 KAT14Q9H8E8 782 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 COG5Q9UP83 839 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
FDPS-215ENST00000490140 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
FDPS-215ENST00000490140 EFCAB14O75071 495 aa13.77□□□□□ -0.21
FDPS-215ENST00000490140 IQCF3P0C7M6 154 aa13.77□□□□□ -0.21
FDPS-215ENST00000490140 POU3F3P20264 500 aaPredicted RBP13.77□□□□□ -0.21
FDPS-215ENST00000490140 CASTP20810 708 aaKnown RBP13.77□□□□□ -0.21
FDPS-215ENST00000490140 PTGS1P23219 599 aa13.77□□□□□ -0.21
FDPS-215ENST00000490140 HAND2P61296 217 aa13.77□□□□□ -0.21
FDPS-215ENST00000490140 NMIQ13287 307 aaPredicted RBP13.77□□□□□ -0.21
FDPS-215ENST00000490140 STXBP2Q15833 593 aa13.77□□□□□ -0.21
FDPS-215ENST00000490140 PTGISQ16647 500 aa13.77□□□□□ -0.21
FDPS-215ENST00000490140 PNMA1Q8ND90 353 aa13.77□□□□□ -0.21
FDPS-215ENST00000490140 C1QTNF1Q9BXJ1 281 aa13.77□□□□□ -0.21
FDPS-215ENST00000490140 MRPL11Q9Y3B7 192 aaKnown RBP13.77□□□□□ -0.21
FDPS-215ENST00000490140 CHMP4BP1P59074 171 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 TRAF1Q13077 416 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 CDC37Q16543 378 aaPredicted RBP13.76□□□□□ -0.21
FDPS-215ENST00000490140 DGKDQ16760 1214 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 TMEM63BQ5T3F8 832 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 ZNF589Q86UQ0 364 aaPredicted RBP13.76□□□□□ -0.21
FDPS-215ENST00000490140 SESTD1Q86VW0 696 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 HERC6Q8IVU3 1022 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 RILPL2Q969X0 211 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 DIAPH3Q9NSV4 1193 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 XIRP2A4UGR9 3374 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 PRRC2BQ5JSZ5 2229 aaKnown RBP13.76□□□□□ -0.21
FDPS-215ENST00000490140 SCN5AQ14524 2016 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 MYH6P13533 1939 aa13.76□□□□□ -0.21
FDPS-215ENST00000490140 TLL1O43897 1013 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 MMP3P08254 477 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 SELPP16109 830 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 COL9A1P20849 921 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 IMMTQ16891 758 aaKnown RBP13.75□□□□□ -0.21
FDPS-215ENST00000490140 ARHGEF16Q5VV41 709 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 TBC1D10CQ8IV04 446 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 C7orf31Q8N865 590 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 RMDN3Q96TC7 470 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 UBAC1Q9BSL1 405 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 CNNM2Q9H8M5 875 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 CTNNA3Q9UI47 895 aa13.75□□□□□ -0.21
FDPS-215ENST00000490140 KIAA1217Q5T5P2 1943 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 NEDD4P46934 1319 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
FDPS-215ENST00000490140 MYOGP15173 224 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 RBL2Q08999 1139 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 CNKSR3Q6P9H4 555 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 KCNV1Q6PIU1 500 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 SEPT14Q6ZU15 432 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 LRRC8DQ7L1W4 858 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 AFG1LQ8WV93 481 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 ARNTL2Q8WYA1 636 aa13.74□□□□□ -0.21
FDPS-215ENST00000490140 COPS5Q92905 334 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms