RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 PIGSQ96S52 555 aa20.86■□□□□ 0.93
SRM-206ENST00000490101 GJB4Q9NTQ9 266 aa20.86■□□□□ 0.93
SRM-206ENST00000490101 SEC63Q9UGP8 760 aaKnown RBP20.86■□□□□ 0.93
SRM-206ENST00000490101 ZNFX1Q9P2E3 1918 aaKnown RBP20.85■□□□□ 0.93
SRM-206ENST00000490101 PNMA6FA0A0J9YX94 578 aa20.85■□□□□ 0.93
SRM-206ENST00000490101 hCG_1984214I3L0E3 225 aa20.85■□□□□ 0.93
SRM-206ENST00000490101 STAT2P52630 851 aa20.85■□□□□ 0.93
SRM-206ENST00000490101 RTP1P59025 263 aa20.85■□□□□ 0.93
SRM-206ENST00000490101 FOXD4L5Q5VV16 416 aaPredicted RBP20.85■□□□□ 0.93
SRM-206ENST00000490101 ZNF713Q8N859 430 aaPredicted RBP20.85■□□□□ 0.93
SRM-206ENST00000490101 FOXD4L4Q8WXT5 416 aaPredicted RBP20.85■□□□□ 0.93
SRM-206ENST00000490101 SLF1Q9BQI6 1058 aa20.85■□□□□ 0.93
SRM-206ENST00000490101 ZSCAN16Q9H4T2 348 aaPredicted RBP20.85■□□□□ 0.93
SRM-206ENST00000490101 ZNF214Q9UL59 606 aaPredicted RBP20.85■□□□□ 0.93
SRM-206ENST00000490101 ATP11BQ9Y2G3 1177 aa20.85■□□□□ 0.93
SRM-206ENST00000490101 COL6A3P12111 3177 aa20.85■□□□□ 0.93
SRM-206ENST00000490101 LAMA2P24043 3122 aaKnown RBP20.84■□□□□ 0.93
SRM-206ENST00000490101 ZBTB5O15062 677 aa20.84■□□□□ 0.93
SRM-206ENST00000490101 IKQ13123 557 aaPredicted RBP20.84■□□□□ 0.93
SRM-206ENST00000490101 RESTQ13127 1097 aa20.84■□□□□ 0.93
SRM-206ENST00000490101 HOMER1Q86YM7 354 aa20.84■□□□□ 0.93
SRM-206ENST00000490101 REPS2Q8NFH8 660 aa20.84■□□□□ 0.93
SRM-206ENST00000490101 BARHL2Q9NY43 387 aa20.84■□□□□ 0.93
SRM-206ENST00000490101 VPS54Q9P1Q0 977 aa20.84■□□□□ 0.93
SRM-206ENST00000490101 PRR12Q9ULL5 1215 aa20.84■□□□□ 0.93
SRM-206ENST00000490101 MMP1P03956 469 aa20.83■□□□□ 0.93
SRM-206ENST00000490101 WWC2Q6AWC2 1192 aa20.83■□□□□ 0.93
SRM-206ENST00000490101 FERMT2Q96AC1 680 aa20.83■□□□□ 0.93
SRM-206ENST00000490101 LBHD1Q9BQE6 289 aaPredicted RBP20.83■□□□□ 0.93
SRM-206ENST00000490101 PHF20Q9BVI0 1012 aa20.83■□□□□ 0.93
SRM-206ENST00000490101 PRKAG2Q9UGJ0 569 aa20.83■□□□□ 0.93
SRM-206ENST00000490101 ATP6V1DQ9Y5K8 247 aa20.83■□□□□ 0.93
SRM-206ENST00000490101 PLXNA1Q9UIW2 1896 aa20.82■□□□□ 0.92
SRM-206ENST00000490101 STXBP3O00186 592 aa20.82■□□□□ 0.92
SRM-206ENST00000490101 COPB2P35606 906 aa20.82■□□□□ 0.92
SRM-206ENST00000490101 SAFBQ15424 915 aaKnown RBP eCLIP20.82■□□□□ 0.92
SRM-206ENST00000490101 LRIT3Q3SXY7 679 aa20.82■□□□□ 0.92
SRM-206ENST00000490101 SNRNP48Q6IEG0 339 aaKnown RBP20.82■□□□□ 0.92
SRM-206ENST00000490101 HEATR3Q7Z4Q2 680 aa20.82■□□□□ 0.92
SRM-206ENST00000490101 FERMT3Q86UX7 667 aa20.82■□□□□ 0.92
SRM-206ENST00000490101 GPKOWQ92917 476 aaPredicted RBP eCLIP20.82■□□□□ 0.92
SRM-206ENST00000490101 TINF2Q9BSI4 451 aa20.82■□□□□ 0.92
SRM-206ENST00000490101 KCNJ14Q9UNX9 436 aa20.82■□□□□ 0.92
SRM-206ENST00000490101 CTDP1Q9Y5B0 961 aaPredicted RBP20.82■□□□□ 0.92
SRM-206ENST00000490101 CALML3P27482 149 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 ADCYAP1R1P41586 468 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 LRRC41Q15345 812 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 CDC37Q16543 378 aaPredicted RBP20.81■□□□□ 0.92
SRM-206ENST00000490101 QRICH1Q2TAL8 776 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 ZNF792Q3KQV3 632 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 MCTP1Q6DN14 999 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 SLC39A5Q6ZMH5 540 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 Q7L0L9 218 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 CPXCR1Q8N123 301 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 DEFB123Q8N688 67 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 PRPF38AQ8NAV1 312 aaKnown RBP20.81■□□□□ 0.92
SRM-206ENST00000490101 CCDC148Q8NFR7 591 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 CCDC12Q8WUD4 166 aaPredicted RBP20.81■□□□□ 0.92
SRM-206ENST00000490101 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 TEX13BQ9BXU2 312 aa20.81■□□□□ 0.92
SRM-206ENST00000490101 PPP1R11O60927 126 aaPredicted RBP20.8■□□□□ 0.92
SRM-206ENST00000490101 RARBP10826 455 aa20.8■□□□□ 0.92
SRM-206ENST00000490101 TAL1P17542 331 aaPredicted RBP20.8■□□□□ 0.92
SRM-206ENST00000490101 U2AF2P26368 475 aaKnown RBP eCLIP20.8■□□□□ 0.92
SRM-206ENST00000490101 GALNT17Q6IS24 598 aa20.8■□□□□ 0.92
SRM-206ENST00000490101 TYW1BQ6NUM6 668 aa20.8■□□□□ 0.92
SRM-206ENST00000490101 PPP1R18Q6NYC8 613 aa20.8■□□□□ 0.92
SRM-206ENST00000490101 BRAPQ7Z569 592 aa20.8■□□□□ 0.92
SRM-206ENST00000490101 RANBP17Q9H2T7 1088 aaKnown RBP20.8■□□□□ 0.92
SRM-206ENST00000490101 FOXP1Q9H334 677 aaPredicted RBP20.8■□□□□ 0.92
SRM-206ENST00000490101 XPNPEP3Q9NQH7 507 aa20.8■□□□□ 0.92
SRM-206ENST00000490101 PRDM5Q9NQX1 630 aaPredicted RBP20.8■□□□□ 0.92
SRM-206ENST00000490101 ESYT2A0FGR8 921 aa20.79■□□□□ 0.92
SRM-206ENST00000490101 BAG4O95429 457 aaKnown RBP20.79■□□□□ 0.92
SRM-206ENST00000490101 NLRP5P59047 1200 aa20.79■□□□□ 0.92
SRM-206ENST00000490101 TRAF1Q13077 416 aa20.79■□□□□ 0.92
SRM-206ENST00000490101 NPY5RQ15761 445 aa20.79■□□□□ 0.92
SRM-206ENST00000490101 TRIM60Q495X7 471 aa20.79■□□□□ 0.92
SRM-206ENST00000490101 DIS3L2Q8IYB7 885 aaKnown RBP20.79■□□□□ 0.92
SRM-206ENST00000490101 LENG1Q96BZ8 264 aaPredicted RBP20.79■□□□□ 0.92
SRM-206ENST00000490101 GBP4Q96PP9 640 aa20.79■□□□□ 0.92
SRM-206ENST00000490101 DIS3Q9Y2L1 958 aaKnown RBP20.79■□□□□ 0.92
SRM-206ENST00000490101 RIPK3Q9Y572 518 aa20.79■□□□□ 0.92
SRM-206ENST00000490101 SMCHD1A6NHR9 2005 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 KIF28PB7ZC32 967 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 ZBED4O75132 1171 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 PGK1P00558 417 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 FDX1P10109 184 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 NAPAP54920 295 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 FBXO11Q86XK2 927 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 DAGLBQ8NCG7 672 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 AMNQ9BXJ7 453 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 ZMYND12Q9H0C1 365 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 RAVER2Q9HCJ3 691 aaKnown RBP20.78■□□□□ 0.92
SRM-206ENST00000490101 BRMS1Q9HCU9 246 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 NRBP1Q9UHY1 535 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 CNPY2Q9Y2B0 182 aa20.78■□□□□ 0.92
SRM-206ENST00000490101 BTBD18B2RXH4 712 aa20.77■□□□□ 0.92
SRM-206ENST00000490101 KRT2P35908 639 aa20.77■□□□□ 0.92
SRM-206ENST00000490101 GPR153Q6NV75 609 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms