RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 FBXO46Q6PJ61 603 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-210ENST00000490081 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 SLC30A10Q6XR72 485 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 BLIDQ8IZY5 108 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 REXO1Q8N1G1 1221 aaKnown RBP14.3□□□□□ -0.12
HDAC1-210ENST00000490081 CRYGNQ8WXF5 182 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 MAML3Q96JK9 1138 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 MPHOSPH6Q99547 160 aaKnown RBP14.3□□□□□ -0.12
HDAC1-210ENST00000490081 COL20A1Q9P218 1284 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 GABRQQ9UN88 632 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 TRIM17Q9Y577 477 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 RPTORQ8N122 1335 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 SYNGAP1Q96PV0 1343 aa14.3□□□□□ -0.12
HDAC1-210ENST00000490081 STAM2O75886 525 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 PGK2P07205 417 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 ANP32AP39687 249 aaKnown RBP14.29□□□□□ -0.12
HDAC1-210ENST00000490081 CNTN2Q02246 1040 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 LARP1BQ659C4 914 aaKnown RBP14.29□□□□□ -0.12
HDAC1-210ENST00000490081 NPLOC4Q8TAT6 608 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 TNFRSF25Q93038 417 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 TAAR1Q96RJ0 339 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 RMDN3Q96TC7 470 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 FOXP1Q9H334 677 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-210ENST00000490081 EHMT1Q9H9B1 1298 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 BRMS1Q9HCU9 246 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 PXMP2Q9NR77 195 aa14.29□□□□□ -0.12
HDAC1-210ENST00000490081 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
HDAC1-210ENST00000490081 SPDYE3A6NKU9 549 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 ASTN1O14525 1302 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 TNRC18O15417 2968 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-210ENST00000490081 CYP3A4P08684 503 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC1-210ENST00000490081 HOXA13P31271 388 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-210ENST00000490081 ALDH5A1P51649 535 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-210ENST00000490081 SAFBQ15424 915 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC1-210ENST00000490081 VSIG10LQ86VR7 867 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 PDCD2LQ9BRP1 358 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 TINF2Q9BSI4 451 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 PCDHA6Q9UN73 950 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 PCDHA8Q9Y5H6 950 aa14.28□□□□□ -0.12
HDAC1-210ENST00000490081 ADCY3O60266 1144 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 HSP90AA1P07900 732 aaKnown RBP14.27□□□□□ -0.13
HDAC1-210ENST00000490081 CYP2B6P20813 491 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 SYT1P21579 422 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 KRT2P35908 639 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 SREBF1P36956 1147 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 USP11P51784 963 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 PCNX4Q63HM2 1172 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 KRT25Q7Z3Z0 450 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 RAET1EQ8TD07 263 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 GJB4Q9NTQ9 266 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 BIN2Q9UBW5 565 aaPredicted RBP14.27□□□□□ -0.13
HDAC1-210ENST00000490081 MYH7BA7E2Y1 1941 aa14.27□□□□□ -0.13
HDAC1-210ENST00000490081 MCM3APO60318 1980 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 KIAA1217Q5T5P2 1943 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 EIF3JO75822 258 aaKnown RBP14.26□□□□□ -0.13
HDAC1-210ENST00000490081 NR3C2P08235 984 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 PGM5Q15124 567 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 UBE2SQ16763 222 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 MAP3K21Q5TCX8 1036 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 ARHGEF16Q5VV41 709 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 MOXD1Q6UVY6 613 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 FCHSD1Q86WN1 690 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 DIS3L2Q8IYB7 885 aaKnown RBP14.26□□□□□ -0.13
HDAC1-210ENST00000490081 ANO3Q9BYT9 981 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 ABHD16BQ9H3Z7 469 aa14.26□□□□□ -0.13
HDAC1-210ENST00000490081 RBM47A0AV96 593 aaKnown RBP14.25□□□□□ -0.13
HDAC1-210ENST00000490081 BTBD18B2RXH4 712 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 ADAMTS3O15072 1205 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 MAFGO15525 162 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 DTNBO60941 627 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 SNAI1O95863 264 aaPredicted RBP14.25□□□□□ -0.13
HDAC1-210ENST00000490081 HMGCRP04035 888 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 GRK4P32298 578 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 CIITAP33076 1130 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 STXBP2Q15833 593 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 MFSD14CQ5VZR4 134 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 ARMCX2Q7L311 632 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 NIPA1Q7RTP0 329 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 TRIB2Q92519 343 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 PURBQ96QR8 312 aaKnown RBP14.25□□□□□ -0.13
HDAC1-210ENST00000490081 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 VTA1Q9NP79 307 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 FLRT1Q9NZU1 646 aa14.25□□□□□ -0.13
HDAC1-210ENST00000490081 LRRC37A2A6NM11 1700 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 CYP3A7-CYP3A51PA0A087WV96 503 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 H3BQV1 296 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 TGFB3P10600 412 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 CAPN2P17655 700 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 CYP3A7P24462 503 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 CCND2P30279 289 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 ARHGAP4P98171 946 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 NONOQ15233 471 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC1-210ENST00000490081 CCL14Q16627 93 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 JAKMIP3Q5VZ66 844 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 OXER1Q8TDS5 423 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 INPP4AQ96PE3 977 aaPredicted RBP14.24□□□□□ -0.13
HDAC1-210ENST00000490081 NAP1L4Q99733 375 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms