RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 PXMP2Q9NR77 195 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 V9GY48 417 aaPredicted RBP14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 DNM1LO00429 736 aa14.15□□□□□ -0.14
SMARCD3-213ENST00000489503 COL6A1P12109 1028 aa14.15□□□□□ -0.14
SMARCD3-213ENST00000489503 BEX3Q00994 111 aa14.15□□□□□ -0.14
SMARCD3-213ENST00000489503 TNFAIP2Q03169 654 aa14.15□□□□□ -0.14
SMARCD3-213ENST00000489503 ARHGEF16Q5VV41 709 aa14.15□□□□□ -0.14
SMARCD3-213ENST00000489503 FERMT2Q96AC1 680 aa14.15□□□□□ -0.14
SMARCD3-213ENST00000489503 CEP290O15078 2479 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 KIAA1217Q5T5P2 1943 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 KBTBD13C9JR72 458 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 DUSP11O75319 330 aaKnown RBP14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 ARIH2O95376 493 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 C6orf222P0C671 652 aaPredicted RBP14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 MYCLP12524 364 aaPredicted RBP14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 AK2P54819 239 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 EVCP57679 992 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 TRAF1Q13077 416 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 TLK2Q86UE8 772 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 ARRDC4Q8NCT1 418 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 NSUN6Q8TEA1 469 aaKnown RBP14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 DPF3Q92784 378 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 COPS5Q92905 334 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 PDCD2LQ9BRP1 358 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 SENP6Q9GZR1 1112 aaPredicted RBP14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 TPCN1Q9ULQ1 816 aa14.14□□□□□ -0.15
SMARCD3-213ENST00000489503 STXBP3O00186 592 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 MEIS2O14770 477 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 CTAGE5O15320 804 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 LARGE1O95461 756 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 NR3C2P08235 984 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 NAPAP54920 295 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 PGM5Q15124 567 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 NTRK3Q16288 839 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 LRRC26Q2I0M4 334 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 SEPT14Q6ZU15 432 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 C7orf61Q8IZ16 206 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 SMARCC2Q8TAQ2 1214 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 IL17RAQ96F46 866 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 PGBD1Q96JS3 809 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 MPHOSPH6Q99547 160 aaKnown RBP14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 HTATIP2Q9BUP3 242 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 SLC26A6Q9BXS9 759 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 WDR11Q9BZH6 1224 aa14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 UPF3AQ9H1J1 476 aaKnown RBP14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 GNEQ9Y223 722 aaKnown RBP14.13□□□□□ -0.15
SMARCD3-213ENST00000489503 LOC102724159A0A0B4J2E5 919 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 CCDC196A0A1B0GTZ2 297 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 ADAMTS3O15072 1205 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 DYNC1LI2O43237 492 aaPredicted RBP14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 SORBS3O60504 671 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 GJA9P57773 515 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 PWP2Q15269 919 aaKnown RBP14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 PKN1Q16512 942 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 RNF180Q86T96 592 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 KLHDC9Q8NEP7 349 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 CUL5Q93034 780 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 PSTPIP2Q9H939 334 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 FRMPD4Q14CM0 1322 aa14.12□□□□□ -0.15
SMARCD3-213ENST00000489503 A0A1W2PQ45 241 aaPredicted RBP14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 A0A1W2PQY0 241 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 RBM47A0AV96 593 aaKnown RBP14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 EIF5BO60841 1220 aaKnown RBP14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 SCG2P13521 617 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 CAPN2P17655 700 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 NEK4P51957 841 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 SCRN1Q12765 414 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 PPP2R5BQ15173 497 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 STXBP2Q15833 593 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 KCNA10Q16322 511 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 PFKFB3Q16875 520 aaPredicted RBP14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 IQSEC1Q6DN90 963 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 OR6J1Q8NGC5 347 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 SCFD2Q8WU76 684 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 ZNF274Q96GC6 653 aaPredicted RBP14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 IWS1Q96ST2 819 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 KIF2CQ99661 725 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 C22orf23Q9BZE7 217 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 MAF1Q9H063 256 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 TMEM260Q9NX78 707 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 BARHL2Q9NY43 387 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 PHF24Q9UPV7 400 aa14.11□□□□□ -0.15
SMARCD3-213ENST00000489503 DOCK5Q9H7D0 1870 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 B4DLN1 442 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 H0YGN5 161 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 PIK3CDO00329 1044 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 PRPF3O43395 683 aaKnown RBP14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 RGS20O76081 388 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 TXNP10599 105 aaKnown RBP14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 IFNAR1P17181 557 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 CCND2P30279 289 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 ADCY7P51828 1080 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 MRPL12P52815 198 aaKnown RBP14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 ACLYP53396 1101 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 FSCN1Q16658 493 aaKnown RBP14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 LY6KQ17RY6 165 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 DUSP28Q4G0W2 176 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 GNASQ5JWF2 1037 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 CCSAPQ6IQ19 270 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms