RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 HOXA7P31268 230 aaPredicted RBP10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 FLT3LGP49771 235 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 DYNLL1P63167 89 aaKnown RBP10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 CERKLQ49MI3 558 aaPredicted RBP10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 TREML2Q5T2D2 321 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 SLC9C2Q5TAH2 1124 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 SYT9Q86SS6 491 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 METTL16Q86W50 562 aaKnown RBP10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 SIX5Q8N196 739 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 GLMNQ92990 594 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 GPATCH3Q96I76 525 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 HSH2DQ96JZ2 352 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 DNAJC2Q99543 621 aaKnown RBP10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 SLC30A3Q99726 388 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 ASCC2Q9H1I8 757 aaPredicted RBP10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 EHD4Q9H223 541 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 TFIP11Q9UBB9 837 aaKnown RBP10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 ZBTB21Q9ULJ3 1066 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 NAV1Q8NEY1 1877 aa10.65□□□□□ -0.7
TNRC6B-208ENST00000489500 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 M0R2N6 131 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 GOLIM4O00461 696 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 GJA8P48165 433 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 CCNA1P78396 465 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 CAP1Q01518 475 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 ABCB5Q2M3G0 1257 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 LRRFIP1Q32MZ4 808 aaKnown RBP10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 ADGRA1Q86SQ6 560 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 CCDC84Q86UT8 332 aaPredicted RBP10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 GPRC5AQ8NFJ5 357 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 LRRCC1Q9C099 1032 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 PHACTR1Q9C0D0 580 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 ZBTB40Q9NUA8 1239 aa10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 GPC6Q9Y625 555 aaPredicted RBP10.64□□□□□ -0.71
TNRC6B-208ENST00000489500 TFRCP02786 760 aaKnown RBP10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 CTGFP29279 349 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 MAPK4P31152 587 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 C1orf53Q5VUE5 145 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 SOCS4Q8WXH5 440 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 DPF3Q92784 378 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 MDFIQ99750 246 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 PAG1Q9NWQ8 432 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 MCM9Q9NXL9 1143 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 SWAP70Q9UH65 585 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
TNRC6B-208ENST00000489500 ZNF532Q9HCE3 1301 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 C1QTNF9BB2RNN3 333 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L20D6RJB6 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 PIK3R2O00459 728 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 MPHOSPH10O00566 681 aaKnown RBP10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 GH2P01242 217 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 PDE6AP16499 860 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 ATP5JP18859 108 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 HERVK_113P62684 666 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 USP17L24Q0WX57 530 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 TATDN1Q6P1N9 297 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 TRIM11Q96F44 468 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 ANTXR1Q9H6X2 564 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 SH2D4AQ9H788 454 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 ATP8A2Q9NTI2 1148 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 MORF4L1Q9UBU8 362 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 GABRQQ9UN88 632 aa10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 MAFBQ9Y5Q3 323 aaPredicted RBP10.62□□□□□ -0.71
TNRC6B-208ENST00000489500 ELOA3CA0A087WX78 387 aaPredicted RBP10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 ELOA3DA6NLF2 546 aaPredicted RBP10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 SGPL1O95470 568 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 HMGCRP04035 888 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 RASA1P20936 1047 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 RRP1BQ14684 758 aaKnown RBP10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 TMEM132AQ24JP5 1023 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 ELOA3BQ3SY89 546 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 CD163Q86VB7 1156 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 ELOA3Q8NG57 546 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 U2AF1L4Q8WU68 220 aaKnown RBP10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 P2RX7Q99572 595 aaKnown RBP10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 BOLA2Q9H3K6 86 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 IVNS1ABPQ9Y6Y0 642 aa10.61□□□□□ -0.71
TNRC6B-208ENST00000489500 FARP2O94887 1054 aaPredicted RBP10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 ELNP15502 786 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 RGS2P41220 211 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 C12orf42Q96LP6 360 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 CCDC17Q96LX7 622 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 CEP63Q96MT8 703 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 HAUS7Q99871 368 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 PAGR1Q9BTK6 254 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 KIAA1683Q9H0B3 1180 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 HOXC10Q9NYD6 342 aa10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 NOP53Q9NZM5 478 aaKnown RBP10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 RABGAP1Q9Y3P9 1069 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms