RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
ACTN4-206ENST00000489451 PCP11498 1178 aaKnown RBP13.81□□□□□ -0.2
ACTN4-206ENST00000489451 CYP2C9P11712 490 aa13.81□□□□□ -0.2
ACTN4-206ENST00000489451 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
ACTN4-206ENST00000489451 SCLYQ96I15 445 aa13.81□□□□□ -0.2
ACTN4-206ENST00000489451 ADD3Q9UEY8 706 aaKnown RBP13.81□□□□□ -0.2
ACTN4-206ENST00000489451 PTPRSQ13332 1948 aa13.81□□□□□ -0.2
ACTN4-206ENST00000489451 KIAA1217Q5T5P2 1943 aa13.81□□□□□ -0.2
ACTN4-206ENST00000489451 TET1Q8NFU7 2136 aa13.81□□□□□ -0.2
ACTN4-206ENST00000489451 MYO9BQ13459 2157 aa13.81□□□□□ -0.2
ACTN4-206ENST00000489451 MUC6Q6W4X9 2439 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 TRANK1O15050 2925 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 CACNA1AO00555 2505 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 B4E1Z4 1266 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 ZEB2O60315 1214 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 USH1GQ495M9 461 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 CWC27Q6UX04 472 aaKnown RBP13.8□□□□□ -0.2
ACTN4-206ENST00000489451 OTOP2Q7RTS6 562 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 OR6J1Q8NGC5 347 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 EXOC6Q8TAG9 804 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 ANKS1AQ92625 1134 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 PRDM12Q9H4Q4 367 aa13.8□□□□□ -0.2
ACTN4-206ENST00000489451 KDM4AO75164 1064 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 FGBP02675 491 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 MYOGP15173 224 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 RABGGTBP53611 331 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 AAMPQ13685 434 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 CDC37Q16543 378 aaPredicted RBP13.79□□□□□ -0.2
ACTN4-206ENST00000489451 CCDC62Q6P9F0 684 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 ENAHQ8N8S7 591 aaPredicted RBP13.79□□□□□ -0.2
ACTN4-206ENST00000489451 PNMA1Q8ND90 353 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 DNERQ8NFT8 737 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 ESR2Q92731 530 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 CTAGE1Q96RT6 745 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 NKX2-4Q9H2Z4 354 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 EPHX3Q9H6B9 360 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 TNKSO95271 1327 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 XIRP2A4UGR9 3374 aa13.79□□□□□ -0.2
ACTN4-206ENST00000489451 A6NJR5 290 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 ZNF213O14771 459 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 OPLAHO14841 1288 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 MYL3P08590 195 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 CPT1AP50416 773 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 TTLL4Q14679 1199 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 PPP2R5BQ15173 497 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 CCDC85BQ15834 202 aaPredicted RBP13.78□□□□□ -0.2
ACTN4-206ENST00000489451 SLC35G1Q2M3R5 365 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 NBPF20Q3BBV1 942 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
ACTN4-206ENST00000489451 ADGRF4Q8IZF3 695 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 SYTL5Q8TDW5 730 aaPredicted RBP13.78□□□□□ -0.2
ACTN4-206ENST00000489451 TAAR1Q96RJ0 339 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 MTG1Q9BT17 334 aaPredicted RBP13.78□□□□□ -0.2
ACTN4-206ENST00000489451 SEZ6LQ9BYH1 1024 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 RNF41Q9H4P4 317 aaPredicted RBP13.78□□□□□ -0.2
ACTN4-206ENST00000489451 POLR3EQ9NVU0 708 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 ZSWIM5Q9P217 1185 aa13.78□□□□□ -0.2
ACTN4-206ENST00000489451 TRIP12Q14669 1992 aaPredicted RBP13.78□□□□□ -0.2
ACTN4-206ENST00000489451 GSPT1P15170 499 aaKnown RBP13.77□□□□□ -0.21
ACTN4-206ENST00000489451 PDE4AP27815 886 aa13.77□□□□□ -0.21
ACTN4-206ENST00000489451 PDE4DQ08499 809 aa13.77□□□□□ -0.21
ACTN4-206ENST00000489451 GPNMBQ14956 572 aa13.77□□□□□ -0.21
ACTN4-206ENST00000489451 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
ACTN4-206ENST00000489451 RGS22Q8NE09 1264 aa13.77□□□□□ -0.21
ACTN4-206ENST00000489451 SCFD2Q8WU76 684 aa13.77□□□□□ -0.21
ACTN4-206ENST00000489451 ZSCAN10Q96SZ4 725 aaPredicted RBP13.77□□□□□ -0.21
ACTN4-206ENST00000489451 DSCC1Q9BVC3 393 aa13.77□□□□□ -0.21
ACTN4-206ENST00000489451 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
ACTN4-206ENST00000489451 RWDD1Q9H446 243 aaPredicted RBP13.77□□□□□ -0.21
ACTN4-206ENST00000489451 NKRFO15226 690 aaKnown RBP eCLIP13.76□□□□□ -0.21
ACTN4-206ENST00000489451 PPP1R11O60927 126 aaPredicted RBP13.76□□□□□ -0.21
ACTN4-206ENST00000489451 ARHGEF15O94989 841 aa13.76□□□□□ -0.21
ACTN4-206ENST00000489451 TXNP10599 105 aaKnown RBP13.76□□□□□ -0.21
ACTN4-206ENST00000489451 ARHGAP1Q07960 439 aa13.76□□□□□ -0.21
ACTN4-206ENST00000489451 SEC23AQ15436 765 aa13.76□□□□□ -0.21
ACTN4-206ENST00000489451 RAB30Q15771 203 aa13.76□□□□□ -0.21
ACTN4-206ENST00000489451 STAG2Q8N3U4 1231 aa13.76□□□□□ -0.21
ACTN4-206ENST00000489451 KAT2BQ92831 832 aa13.76□□□□□ -0.21
ACTN4-206ENST00000489451 JMJD4Q9H9V9 463 aa13.76□□□□□ -0.21
ACTN4-206ENST00000489451 PNMA2Q9UL42 364 aa13.76□□□□□ -0.21
ACTN4-206ENST00000489451 ABCB11O95342 1321 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 FAM86C2PA6NEL3 165 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 MMP3P08254 477 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 MFAP1P55081 439 aaKnown RBP13.75□□□□□ -0.21
ACTN4-206ENST00000489451 LY6KQ17RY6 165 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 ASPRV1Q53RT3 343 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 NFRKBQ6P4R8 1299 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 CYB5R4Q7L1T6 521 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 DEFB128Q7Z7B8 93 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 AFG1LQ8WV93 481 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 MTMR8Q96EF0 704 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 KAT14Q9H8E8 782 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 MSRAQ9UJ68 235 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 TAF6LQ9Y6J9 622 aa13.75□□□□□ -0.21
ACTN4-206ENST00000489451 MYH7BA7E2Y1 1941 aa13.74□□□□□ -0.21
ACTN4-206ENST00000489451 GPR37L1O60883 481 aa13.74□□□□□ -0.21
ACTN4-206ENST00000489451 IQCF3P0C7M6 154 aa13.74□□□□□ -0.21
ACTN4-206ENST00000489451 IGFBP4P22692 258 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms