RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 ADAMTS4O75173 837 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 SMPD1P17405 629 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 ATN1P54259 1190 aaPredicted RBP18.17■□□□□ 0.5
LMX1A-204ENST00000489443 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
LMX1A-204ENST00000489443 GHRHRQ02643 423 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 FUT2Q10981 343 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 TOB2Q14106 344 aaPredicted RBP18.17■□□□□ 0.5
LMX1A-204ENST00000489443 PPP2R5BQ15173 497 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 TMEM63BQ5T3F8 832 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 HEATR3Q7Z4Q2 680 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 IWS1Q96ST2 819 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 LARP6Q9BRS8 491 aaKnown RBP18.17■□□□□ 0.5
LMX1A-204ENST00000489443 WDR11Q9BZH6 1224 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 PXMP2Q9NR77 195 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 PDRG1Q9NUG6 133 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 CNTNAP5Q8WYK1 1306 aa18.17■□□□□ 0.5
LMX1A-204ENST00000489443 DYNC1LI2O43237 492 aaPredicted RBP18.16■□□□□ 0.5
LMX1A-204ENST00000489443 NR3C2P08235 984 aa18.16■□□□□ 0.5
LMX1A-204ENST00000489443 PTGS1P23219 599 aa18.16■□□□□ 0.5
LMX1A-204ENST00000489443 ANAPC15P60006 121 aa18.16■□□□□ 0.5
LMX1A-204ENST00000489443 STXBP2Q15833 593 aa18.16■□□□□ 0.5
LMX1A-204ENST00000489443 GPKOWQ92917 476 aaPredicted RBP eCLIP18.16■□□□□ 0.5
LMX1A-204ENST00000489443 CUL5Q93034 780 aa18.16■□□□□ 0.5
LMX1A-204ENST00000489443 AP5M1Q9H0R1 490 aa18.16■□□□□ 0.5
LMX1A-204ENST00000489443 NR2E3Q9Y5X4 410 aa18.16■□□□□ 0.5
LMX1A-204ENST00000489443 MYADML2A6NDP7 307 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 H0YGN5 161 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 MYCLP12524 364 aaPredicted RBP18.15■□□□□ 0.5
LMX1A-204ENST00000489443 PDIA3P30101 505 aaKnown RBP18.15■□□□□ 0.5
LMX1A-204ENST00000489443 GJA9P57773 515 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 CCT2P78371 535 aaKnown RBP18.15■□□□□ 0.5
LMX1A-204ENST00000489443 KCNA10Q16322 511 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 LRRC26Q2I0M4 334 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 GNASQ5JWF2 1037 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 PRPF38BQ5VTL8 546 aaKnown RBP18.15■□□□□ 0.5
LMX1A-204ENST00000489443 USP17L6PQ6QN14 398 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 SEPT14Q6ZU15 432 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 TLK2Q86UE8 772 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 C7orf61Q8IZ16 206 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 KLHDC9Q8NEP7 349 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 SMARCC2Q8TAQ2 1214 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 UPF3AQ9H1J1 476 aaKnown RBP18.15■□□□□ 0.5
LMX1A-204ENST00000489443 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 PHF24Q9UPV7 400 aa18.15■□□□□ 0.5
LMX1A-204ENST00000489443 GNEQ9Y223 722 aaKnown RBP18.15■□□□□ 0.5
LMX1A-204ENST00000489443 RBM47A0AV96 593 aaKnown RBP18.14■□□□□ 0.49
LMX1A-204ENST00000489443 EVCP57679 992 aa18.14■□□□□ 0.49
LMX1A-204ENST00000489443 BEX3Q00994 111 aa18.14■□□□□ 0.49
LMX1A-204ENST00000489443 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
LMX1A-204ENST00000489443 DUSP28Q4G0W2 176 aa18.14■□□□□ 0.49
LMX1A-204ENST00000489443 SCFD2Q8WU76 684 aa18.14■□□□□ 0.49
LMX1A-204ENST00000489443 PDCD2LQ9BRP1 358 aa18.14■□□□□ 0.49
LMX1A-204ENST00000489443 TSEN34Q9BSV6 310 aaKnown RBP18.14■□□□□ 0.49
LMX1A-204ENST00000489443 NCOA5Q9HCD5 579 aaKnown RBP18.14■□□□□ 0.49
LMX1A-204ENST00000489443 PPFIA3O75145 1194 aa18.13■□□□□ 0.49
LMX1A-204ENST00000489443 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
LMX1A-204ENST00000489443 TXNP10599 105 aaKnown RBP18.13■□□□□ 0.49
LMX1A-204ENST00000489443 ACLYP53396 1101 aa18.13■□□□□ 0.49
LMX1A-204ENST00000489443 NAPAP54920 295 aa18.13■□□□□ 0.49
LMX1A-204ENST00000489443 WWC2Q6AWC2 1192 aa18.13■□□□□ 0.49
LMX1A-204ENST00000489443 SLC39A5Q6ZMH5 540 aa18.13■□□□□ 0.49
LMX1A-204ENST00000489443 PCSK9Q8NBP7 692 aaKnown RBP18.13■□□□□ 0.49
LMX1A-204ENST00000489443 IL31RAQ8NI17 732 aa18.13■□□□□ 0.49
LMX1A-204ENST00000489443 KIAA1217Q5T5P2 1943 aa18.13■□□□□ 0.49
LMX1A-204ENST00000489443 A0A1W2PQ45 241 aaPredicted RBP18.12■□□□□ 0.49
LMX1A-204ENST00000489443 A0A1W2PQY0 241 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 MEIS2O14770 477 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 CTAGE5O15320 804 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 ASGR1P07306 291 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 CST5P28325 142 aaPredicted RBP18.12■□□□□ 0.49
LMX1A-204ENST00000489443 CCND2P30279 289 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 STK3Q13188 491 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 TTLL4Q14679 1199 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 PGM5Q15124 567 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 FSCN1Q16658 493 aaKnown RBP18.12■□□□□ 0.49
LMX1A-204ENST00000489443 CCSAPQ6IQ19 270 aaPredicted RBP18.12■□□□□ 0.49
LMX1A-204ENST00000489443 VSIG10LQ86VR7 867 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 PHKBQ93100 1093 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 VTI1AQ96AJ9 217 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 ZNF274Q96GC6 653 aaPredicted RBP18.12■□□□□ 0.49
LMX1A-204ENST00000489443 ZFP91Q96JP5 570 aaPredicted RBP18.12■□□□□ 0.49
LMX1A-204ENST00000489443 ATP11BQ9Y2G3 1177 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 Q9Y3F1 56 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 NID2Q14112 1375 aa18.12■□□□□ 0.49
LMX1A-204ENST00000489443 MOXD2PA6NHM9 499 aa18.11■□□□□ 0.49
LMX1A-204ENST00000489443 PIK3CDO00329 1044 aa18.11■□□□□ 0.49
LMX1A-204ENST00000489443 RTP1P59025 263 aa18.11■□□□□ 0.49
LMX1A-204ENST00000489443 AKAP17AQ02040 695 aaKnown RBP18.11■□□□□ 0.49
LMX1A-204ENST00000489443 UBE2SQ16763 222 aa18.11■□□□□ 0.49
LMX1A-204ENST00000489443 OR6J1Q8NGC5 347 aa18.11■□□□□ 0.49
LMX1A-204ENST00000489443 COPS5Q92905 334 aa18.11■□□□□ 0.49
LMX1A-204ENST00000489443 STXBP3O00186 592 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 NKRFO15226 690 aaKnown RBP eCLIP18.1■□□□□ 0.49
LMX1A-204ENST00000489443 PRPF3O43395 683 aaKnown RBP18.1■□□□□ 0.49
LMX1A-204ENST00000489443 ARIH2O95376 493 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 SCG2P13521 617 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 NKX3-2P78367 333 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 NTRK3Q16288 839 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 LY6KQ17RY6 165 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 TYW1BQ6NUM6 668 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms