RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 RCBTB1Q8NDN9 531 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 MZB1Q8WU39 189 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 DIO2Q92813 273 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 OSBP2Q969R2 916 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 ARMC5Q96C12 935 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 SGSM3Q96HU1 749 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 NBPF4Q96M43 638 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 CCDC140Q96MF4 163 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 EPB41L4AQ9HCS5 686 aaPredicted RBP5.81□□□□□ -1.48
RFC4-213ENST00000489028 BTG4Q9NY30 223 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.81□□□□□ -1.48
RFC4-213ENST00000489028 MARCH2Q9P0N8 246 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 SIT1Q9Y3P8 196 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 PCDHA5Q9Y5H7 936 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 IRS2Q9Y4H2 1338 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 FAM221BA6H8Z2 402 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 IRS4O14654 1257 aaPredicted RBP5.8□□□□□ -1.48
RFC4-213ENST00000489028 N4BP3O15049 544 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 PDPK1O15530 556 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 ADCY3O60266 1144 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 DIAPH1O60610 1272 aaKnown RBP5.8□□□□□ -1.48
RFC4-213ENST00000489028 NTRK1P04629 796 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 BCL6P41182 706 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 TMEM62Q0P6H9 643 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 MAP4K2Q12851 820 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 KCNAB2Q13303 367 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 RASGRF1Q13972 1273 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 RASA3Q14644 834 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 OLFML2BQ68BL8 750 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 WWC2Q6AWC2 1192 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 LRRC56Q8IYG6 542 aaPredicted RBP5.8□□□□□ -1.48
RFC4-213ENST00000489028 TMEFF1Q8IYR6 380 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 PANK1Q8TE04 598 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 AARSD1Q9BTE6 412 aaKnown RBP5.8□□□□□ -1.48
RFC4-213ENST00000489028 HIRIP3Q9BW71 556 aaPredicted RBP5.8□□□□□ -1.48
RFC4-213ENST00000489028 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 PFDN2Q9UHV9 154 aa5.8□□□□□ -1.48
RFC4-213ENST00000489028 U2SURPO15042 1029 aaKnown RBP5.79□□□□□ -1.48
RFC4-213ENST00000489028 PRODHO43272 600 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 PI3P19957 117 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 LTBRP36941 435 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 RPL11P62913 178 aaKnown RBP5.79□□□□□ -1.48
RFC4-213ENST00000489028 HSP90AA2PQ14568 343 aaPredicted RBP5.79□□□□□ -1.48
RFC4-213ENST00000489028 NTRK3Q16288 839 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 IQCEQ6IPM2 695 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 LCNL1Q6ZST4 164 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 Q8N1Y9 231 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 USP33Q8TEY7 942 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 KCTD13Q8WZ19 329 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 SPATA9Q9BWV2 254 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 CCDC113Q9H0I3 377 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 SIRPGQ9P1W8 387 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 KCTD3Q9Y597 815 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 TIMM13Q9Y5L4 95 aaPredicted RBP5.79□□□□□ -1.48
RFC4-213ENST00000489028 NPFFR2Q9Y5X5 522 aa5.79□□□□□ -1.48
RFC4-213ENST00000489028 BLACEA4D250 179 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 IQCA1LA6NCM1 817 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 C22orf46C9J442 243 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 MSCO60682 206 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 FGFR1P11362 822 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 PABPC1P11940 636 aaKnown RBP5.78□□□□□ -1.48
RFC4-213ENST00000489028 ATF2P15336 505 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 IGFBP6P24592 240 aaPredicted RBP5.78□□□□□ -1.48
RFC4-213ENST00000489028 FZD5Q13467 585 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 FOXB2Q5VYV0 432 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 SPOCD1Q6ZMY3 1216 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 NPM2Q86SE8 214 aaKnown RBP5.78□□□□□ -1.48
RFC4-213ENST00000489028 CABP7Q86V35 215 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 NETO2Q8NC67 525 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 SREK1Q8WXA9 508 aaKnown RBP5.78□□□□□ -1.48
RFC4-213ENST00000489028 ZNF669Q96BR6 464 aaPredicted RBP5.78□□□□□ -1.48
RFC4-213ENST00000489028 TSPAN17Q96FV3 270 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 SIGLEC10Q96LC7 697 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 TOX2Q96NM4 488 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 SNTG2Q9NY99 539 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 CNOT6Q9ULM6 557 aaKnown RBP5.78□□□□□ -1.48
RFC4-213ENST00000489028 PCDHA2Q9Y5H9 948 aa5.78□□□□□ -1.48
RFC4-213ENST00000489028 ARID1BQ8NFD5 2236 aaPredicted RBP5.78□□□□□ -1.48
RFC4-213ENST00000489028 ASGR2P07307 311 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 MC3RP41968 323 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 SF3A1Q15459 793 aaKnown RBP5.77□□□□□ -1.49
RFC4-213ENST00000489028 MTERF2Q49AM1 385 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 USP53Q70EK8 1073 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 CEP68Q76N32 757 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 LRRC47Q8N1G4 583 aaKnown RBP5.77□□□□□ -1.49
RFC4-213ENST00000489028 PMFBP1Q8TBY8 1022 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 DEPDC7Q96QD5 511 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 DNAJC2Q99543 621 aaKnown RBP5.77□□□□□ -1.49
RFC4-213ENST00000489028 IRF2BPLQ9H1B7 796 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 PPARGC1AQ9UBK2 798 aaKnown RBP5.77□□□□□ -1.49
RFC4-213ENST00000489028 DBR1Q9UK59 544 aaKnown RBP5.77□□□□□ -1.49
RFC4-213ENST00000489028 IRAK3Q9Y616 596 aa5.77□□□□□ -1.49
RFC4-213ENST00000489028 TRAV20A0A0B4J274 112 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 NUAK1O60285 661 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 BUB1BO60566 1050 aaPredicted RBP5.76□□□□□ -1.49
RFC4-213ENST00000489028 PMLP29590 882 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 LIMS1P48059 325 aa5.76□□□□□ -1.49
RFC4-213ENST00000489028 SSRP1Q08945 709 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms