RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 USP2O75604 605 aaPredicted RBP22.8■■□□□ 1.24
NECAB3-213ENST00000488489 SREBF1P36956 1147 aa22.8■■□□□ 1.24
NECAB3-213ENST00000488489 USP14P54578 494 aa22.8■■□□□ 1.24
NECAB3-213ENST00000488489 MCTP2Q6DN12 878 aa22.8■■□□□ 1.24
NECAB3-213ENST00000488489 RASSF8Q8NHQ8 419 aa22.8■■□□□ 1.24
NECAB3-213ENST00000488489 MBOAT7Q96N66 472 aa22.8■■□□□ 1.24
NECAB3-213ENST00000488489 UIMC1Q96RL1 719 aa22.8■■□□□ 1.24
NECAB3-213ENST00000488489 SMC2O95347 1197 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 CUL4BQ13620 913 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 FCHSD1Q86WN1 690 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.79■■□□□ 1.243e-11■■■□□ 16.1
NECAB3-213ENST00000488489 RPAP3Q9H6T3 665 aaPredicted RBP22.79■■□□□ 1.24
NECAB3-213ENST00000488489 LRWD1Q9UFC0 647 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 FLOT1O75955 427 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 ICAM1P05362 532 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 PLCG1P19174 1290 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 TRIML1Q8N9V2 468 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 DCPSQ96C86 337 aaKnown RBP22.79■■□□□ 1.24
NECAB3-213ENST00000488489 AS3MTQ9HBK9 375 aa22.79■■□□□ 1.24
NECAB3-213ENST00000488489 MRPL11Q9Y3B7 192 aaKnown RBP22.79■■□□□ 1.24
NECAB3-213ENST00000488489 FAM86B1E9PN63 330 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 FAM86B2P0C5J1 330 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 PDIA5Q14554 519 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 MOXD1Q6UVY6 613 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 ZNF830Q96NB3 372 aaPredicted RBP22.78■■□□□ 1.24
NECAB3-213ENST00000488489 GSDMAQ96QA5 445 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 NAP1L4Q99733 375 aaKnown RBP22.78■■□□□ 1.24
NECAB3-213ENST00000488489 KCNMB3Q9NPA1 279 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 HMGCS2P54868 508 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 NOLC1Q14978 699 aaKnown RBP eCLIP22.78■■□□□ 1.24
NECAB3-213ENST00000488489 TMEM266Q2M3C6 531 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 DPY19L2Q6NUT2 758 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 PLA2G4DQ86XP0 818 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 LENG9Q96B70 501 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 L3MBTL3Q96JM7 780 aaPredicted RBP22.78■■□□□ 1.24
NECAB3-213ENST00000488489 NUDT12Q9BQG2 462 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 TRIM5Q9C035 493 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 HSD3B7Q9H2F3 369 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 SLC38A10Q9HBR0 1119 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 CCPG1Q9ULG6 757 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 PPP1R9AQ9ULJ8 1098 aa22.78■■□□□ 1.24
NECAB3-213ENST00000488489 ABCB11O95342 1321 aa22.77■■□□□ 1.24
NECAB3-213ENST00000488489 GCOM1H8Y6P7 765 aaPredicted RBP22.77■■□□□ 1.24
NECAB3-213ENST00000488489 GTPBP6O43824 516 aaPredicted RBP22.77■■□□□ 1.24
NECAB3-213ENST00000488489 POLR2MP0CAP2 368 aa22.77■■□□□ 1.24
NECAB3-213ENST00000488489 NOL9Q5SY16 702 aaKnown RBP22.77■■□□□ 1.24
NECAB3-213ENST00000488489 SARM1Q6SZW1 724 aa22.77■■□□□ 1.24
NECAB3-213ENST00000488489 MTERF4Q7Z6M4 381 aaKnown RBP22.77■■□□□ 1.24
NECAB3-213ENST00000488489 SULF1Q8IWU6 871 aa22.77■■□□□ 1.24
NECAB3-213ENST00000488489 KBTBD4Q9NVX7 518 aa22.77■■□□□ 1.24
NECAB3-213ENST00000488489 IKBKBO14920 756 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 ZNF75DP51815 510 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 PRR16Q569H4 304 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.76■■□□□ 1.23
NECAB3-213ENST00000488489 CPXCR1Q8N123 301 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 MLKLQ8NB16 471 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 CYP2W1Q8TAV3 490 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 SPTLC3Q9NUV7 552 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 PCDHA12Q9UN75 941 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 GPR162Q16538 588 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 MYRIPQ8NFW9 859 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 WNK4Q96J92 1243 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 PRIMPOLQ96LW4 560 aa22.76■■□□□ 1.23
NECAB3-213ENST00000488489 PARP14Q460N5 1801 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 CIITAP33076 1130 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 FMR1Q06787 632 aaKnown RBP eCLIP22.75■■□□□ 1.23
NECAB3-213ENST00000488489 GRB10Q13322 594 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 Q4G0T1 1027 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 DNTTIP2Q5QJE6 756 aaKnown RBP22.75■■□□□ 1.23
NECAB3-213ENST00000488489 KRT26Q7Z3Y9 468 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 TEX2Q8IWB9 1127 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 ETNPPLQ8TBG4 499 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 MED15Q96RN5 788 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 RAVER2Q9HCJ3 691 aaKnown RBP22.75■■□□□ 1.23
NECAB3-213ENST00000488489 AFG3L2Q9Y4W6 797 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 SMTNL1A8MU46 457 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 MARCH6O60337 910 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 CYP3A4P08684 503 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 VGLL4Q14135 290 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 CLEC4DQ8WXI8 215 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 C12orf42Q96LP6 360 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 PNMA5Q96PV4 448 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 RAB34Q9BZG1 259 aa22.75■■□□□ 1.23
NECAB3-213ENST00000488489 NFIBO00712 420 aa22.74■■□□□ 1.23
NECAB3-213ENST00000488489 TPM3P06753 285 aa22.74■■□□□ 1.23
NECAB3-213ENST00000488489 MYL5Q02045 173 aa22.74■■□□□ 1.23
NECAB3-213ENST00000488489 SMYD4Q8IYR2 804 aaPredicted RBP22.74■■□□□ 1.23
NECAB3-213ENST00000488489 SNCAIPQ9Y6H5 919 aa22.74■■□□□ 1.23
NECAB3-213ENST00000488489 RLFQ13129 1914 aa22.74■■□□□ 1.23
NECAB3-213ENST00000488489 C19orf81C9J6K1 198 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 CD44P16070 742 aaKnown RBP22.73■■□□□ 1.23
NECAB3-213ENST00000488489 EPHX2P34913 555 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 CALML4Q96GE6 196 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 VWA5AO00534 786 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 UBXN2AP68543 259 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 ECM1Q16610 540 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 SPC24Q8NBT2 197 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 ATG4CQ96DT6 458 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 CUEDC2Q9H467 287 aa22.73■■□□□ 1.23
NECAB3-213ENST00000488489 BLOC1S4Q9NUP1 217 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms