RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RNF208Q9H0X6 261 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 EHMT1Q9H9B1 1298 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 RIC8AQ9NPQ8 531 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 PAK6Q9NQU5 681 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-219ENST00000488186 VPS54Q9P1Q0 977 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 NRBP1Q9UHY1 535 aa18.06■□□□□ 0.48
C9orf3-219ENST00000488186 LOC102724159A0A0B4J2E5 919 aa18.05■□□□□ 0.48
C9orf3-219ENST00000488186 PIK3CDO00329 1044 aa18.05■□□□□ 0.48
C9orf3-219ENST00000488186 JAK2O60674 1132 aa18.05■□□□□ 0.48
C9orf3-219ENST00000488186 DTNBO60941 627 aa18.05■□□□□ 0.48
C9orf3-219ENST00000488186 EIF2AK2P19525 551 aaKnown RBP18.05■□□□□ 0.48
C9orf3-219ENST00000488186 HMGN5P82970 282 aaKnown RBP18.05■□□□□ 0.48
C9orf3-219ENST00000488186 GHRHRQ02643 423 aa18.05■□□□□ 0.48
C9orf3-219ENST00000488186 PWP2Q15269 919 aaKnown RBP18.05■□□□□ 0.48
C9orf3-219ENST00000488186 UBE2SQ16763 222 aa18.05■□□□□ 0.48
C9orf3-219ENST00000488186 IWS1Q96ST2 819 aa18.05■□□□□ 0.48
C9orf3-219ENST00000488186 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-219ENST00000488186 ZHX1Q9UKY1 873 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-219ENST00000488186 MEIS2O14770 477 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 MYCLP12524 364 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-219ENST00000488186 CCL5P13501 91 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 PRAMEF19Q5SWL8 479 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 TYW1BQ6NUM6 668 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 TEX2Q8IWB9 1127 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 HSCBQ8IWL3 235 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 ABHD16BQ9H3Z7 469 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 PXMP2Q9NR77 195 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 COL20A1Q9P218 1284 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
C9orf3-219ENST00000488186 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-219ENST00000488186 ESYT2A0FGR8 921 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 FOSP01100 380 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-219ENST00000488186 GJA8P48165 433 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 ACVR2BQ13705 512 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 MTFR1Q15390 333 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 STXBP2Q15833 593 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 MCTP2Q6DN12 878 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 EEPD1Q7L9B9 569 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 FAM177A1Q8N128 213 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-219ENST00000488186 FGD4Q96M96 766 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 AIFM3Q96NN9 605 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 ZMYND12Q9H0C1 365 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 UNC93B1Q9H1C4 597 aa18.03■□□□□ 0.48
C9orf3-219ENST00000488186 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.48
C9orf3-219ENST00000488186 NR3C2P08235 984 aa18.02■□□□□ 0.48
C9orf3-219ENST00000488186 CCND2P30279 289 aa18.02■□□□□ 0.48
C9orf3-219ENST00000488186 ST3GAL1Q11201 340 aa18.02■□□□□ 0.48
C9orf3-219ENST00000488186 GALNT17Q6IS24 598 aa18.02■□□□□ 0.48
C9orf3-219ENST00000488186 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
C9orf3-219ENST00000488186 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.02■□□□□ 0.48
C9orf3-219ENST00000488186 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.48
C9orf3-219ENST00000488186 PCDHA6Q9UN73 950 aa18.02■□□□□ 0.48
C9orf3-219ENST00000488186 SMC3Q9UQE7 1217 aa18.02■□□□□ 0.48
C9orf3-219ENST00000488186 PCDHA8Q9Y5H6 950 aa18.02■□□□□ 0.48
C9orf3-219ENST00000488186 K7ELQ4 463 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-219ENST00000488186 MSCO60682 206 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 CYBAP13498 195 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 FDPSP14324 419 aaKnown RBP18.01■□□□□ 0.47
C9orf3-219ENST00000488186 CCND3P30281 292 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-219ENST00000488186 FOSBP53539 338 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 JAKMIP3Q5VZ66 844 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 SNX21Q969T3 373 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 PDCD2LQ9BRP1 358 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 CRISPLD2Q9H0B8 497 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 VTA1Q9NP79 307 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 FAM184BQ9ULE4 1060 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 KCNJ14Q9UNX9 436 aa18.01■□□□□ 0.47
C9orf3-219ENST00000488186 ASTN1O14525 1302 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 SEPT4O43236 478 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 EIF3JO75822 258 aaKnown RBP18■□□□□ 0.47
C9orf3-219ENST00000488186 SGPL1O95470 568 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 AP3B2Q13367 1082 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 PGM5Q15124 567 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 FBXO16Q8IX29 292 aaPredicted RBP18■□□□□ 0.47
C9orf3-219ENST00000488186 MORC4Q8TE76 937 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 C8orf76Q96K31 380 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 DEFB118Q96PH6 123 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 TMEM260Q9NX78 707 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 PCDHA4Q9UN74 947 aa18■□□□□ 0.47
C9orf3-219ENST00000488186 DDX49Q9Y6V7 483 aaKnown RBP18■□□□□ 0.47
C9orf3-219ENST00000488186 POTEFA5A3E0 1075 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 TFRCP02786 760 aaKnown RBP17.99■□□□□ 0.47
C9orf3-219ENST00000488186 HSP90AA1P07900 732 aaKnown RBP17.99■□□□□ 0.47
C9orf3-219ENST00000488186 ZNF865P0CJ78 1059 aaPredicted RBP17.99■□□□□ 0.47
C9orf3-219ENST00000488186 AKR1A1P14550 325 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 EDNRBP24530 442 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 SAFBQ15424 915 aaKnown RBP eCLIP17.99■□□□□ 0.47
C9orf3-219ENST00000488186 XRRA1Q6P2D8 792 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 SEPT14Q6ZU15 432 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 BLIDQ8IZY5 108 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 ANKLE1Q8NAG6 615 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 TRPV1Q8NER1 839 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 ANO3Q9BYT9 981 aa17.99■□□□□ 0.47
C9orf3-219ENST00000488186 CAPN15O75808 1086 aa17.98■□□□□ 0.47
C9orf3-219ENST00000488186 RARBP10826 455 aa17.98■□□□□ 0.47
C9orf3-219ENST00000488186 ZNF76P36508 570 aa17.98■□□□□ 0.47
C9orf3-219ENST00000488186 SOX10P56693 466 aa17.98■□□□□ 0.47
C9orf3-219ENST00000488186 CCDC144BQ3MJ40 725 aa17.98■□□□□ 0.47
C9orf3-219ENST00000488186 IQSEC1Q6DN90 963 aa17.98■□□□□ 0.47
C9orf3-219ENST00000488186 VSIG10LQ86VR7 867 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms