RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 AGTPBP1Q9UPW5 1226 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 NEDD4P46934 1319 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 TLR2O60603 784 aa9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 VCAM1P19320 739 aa9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 C17orf99Q6UX52 265 aa9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 TMEM179Q6ZVK1 233 aa9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 FASTKD5Q7L8L6 764 aaKnown RBP9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 CTU1Q7Z7A3 348 aaKnown RBP9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 LRRC47Q8N1G4 583 aaKnown RBP9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 CEP95Q96GE4 821 aa9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 PARK7Q99497 189 aaKnown RBP9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 P2RX7Q99572 595 aaKnown RBP9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 ASCC2Q9H1I8 757 aaPredicted RBP9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 TOMM22Q9NS69 142 aa9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 TMOD4Q9NZQ9 345 aa9.23□□□□□ -0.93
NECTIN3-209ENST00000488016 LAMA4Q16363 1823 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 IGKV6D-41A0A0C4DH26 115 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 SGSM2O43147 1006 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 BCRP11274 1271 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 MAP2K3P46734 347 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 TFAP4Q01664 338 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 SP3Q02447 781 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 NCOA4Q13772 614 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 ALX1Q15699 326 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 USP17L2Q6R6M4 530 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 OTOP1Q7RTM1 612 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 ANKRD13CQ8N6S4 541 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 SMCR8Q8TEV9 937 aaPredicted RBP9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 RPAP3Q9H6T3 665 aaPredicted RBP9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 TXNRD2Q9NNW7 524 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 IL17RBQ9NRM6 502 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 MTMR7Q9Y216 660 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 TRIM17Q9Y577 477 aa9.22□□□□□ -0.93
NECTIN3-209ENST00000488016 POM121CA8CG34 1229 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 TMEM229AB2RXF0 380 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 HIP1O00291 1037 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 BACH1O14867 736 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 RANBP6O60518 1105 aaKnown RBP9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 CNMDO75829 334 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 THBS1P07996 1170 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 TSPY3P0CV98 308 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 TSPY8P0CW00 308 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 ZNF444Q8N0Y2 327 aaPredicted RBP9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 C1orf216Q8TAB5 229 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 SCARF2Q96GP6 870 aaPredicted RBP9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 C12orf42Q96LP6 360 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 ZKSCAN3Q9BRR0 538 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 PAGR1Q9BTK6 254 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 KIAA1683Q9H0B3 1180 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 GINM1Q9NU53 330 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 FBXO28Q9NVF7 368 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 CLIP2Q9UDT6 1046 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 ANAPC4Q9UJX5 808 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 PCDHGA11Q9Y5H2 935 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 MYH4Q9Y623 1939 aa9.21□□□□□ -0.94
NECTIN3-209ENST00000488016 TSPY2A6NKD2 308 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 C19orf81C9J6K1 198 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 TAL1P17542 331 aaPredicted RBP9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 ANP32AP39687 249 aaKnown RBP9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 HERVK_113P62684 666 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 IRX3P78415 501 aaPredicted RBP9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 LACTBP83111 547 aaPredicted RBP9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 PDE4BQ07343 736 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 BMP2KLQ5H9B9 411 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 FAM83BQ5T0W9 1011 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 STOX1Q6ZVD7 989 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 NEDD1Q8NHV4 660 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 CCDC17Q96LX7 622 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 DSCC1Q9BVC3 393 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 TANGO6Q9C0B7 1094 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 LSG1Q9H089 658 aaKnown RBP9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 VCPKMTQ9H867 229 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 KANSL2Q9H9L4 492 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 ZCCHC17Q9NP64 241 aaKnown RBP9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 TMX2Q9Y320 296 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 RLFQ13129 1914 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 ZMYM6O95789 1325 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 PLIN4Q96Q06 1357 aa9.2□□□□□ -0.94
NECTIN3-209ENST00000488016 A6NJY4 79 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 B4E1Z4 1266 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP17L15C9J2P7 530 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP17L13C9JLJ4 530 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP17L11C9JVI0 530 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP17L18D6R9N7 530 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP17L22D6RA61 530 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP17L17D6RBQ6 530 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP17L19D6RCP7 530 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP17L20D6RJB6 530 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 CDK2AP1O14519 115 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 ZNF213O14771 459 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 ORC4O43929 436 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 NDUFB10O96000 172 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 SLC3A2P08195 630 aaKnown RBP9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 FGRP09769 529 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 HOXA7P31268 230 aaPredicted RBP9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 PSMC4P43686 418 aa9.19□□□□□ -0.94
NECTIN3-209ENST00000488016 USP14P54578 494 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms