RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SAPCD2Q86UD0 394 aa6.69□□□□□ -1.34
CCDC66-221ENST00000487739 CPA5Q8WXQ8 436 aa6.69□□□□□ -1.34
CCDC66-221ENST00000487739 PPP1R14AQ96A00 147 aa6.69□□□□□ -1.34
CCDC66-221ENST00000487739 MMP19Q99542 508 aa6.69□□□□□ -1.34
CCDC66-221ENST00000487739 BCAS3Q9H6U6 928 aa6.69□□□□□ -1.34
CCDC66-221ENST00000487739 PPP1R11O60927 126 aaPredicted RBP6.68□□□□□ -1.34
CCDC66-221ENST00000487739 ATF4P18848 351 aaPredicted RBP6.68□□□□□ -1.34
CCDC66-221ENST00000487739 DCP2Q8IU60 420 aaKnown RBP6.68□□□□□ -1.34
CCDC66-221ENST00000487739 TRIM59Q8IWR1 403 aa6.68□□□□□ -1.34
CCDC66-221ENST00000487739 ADAM7Q9H2U9 754 aa6.68□□□□□ -1.34
CCDC66-221ENST00000487739 CAPN10Q9HC96 672 aa6.68□□□□□ -1.34
CCDC66-221ENST00000487739 SH3D21A4FU49 640 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 FUCA1P04066 466 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 CELA3BP08861 270 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 GTF2IRD2BQ6EKJ0 949 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 GTF2IRD2Q86UP8 949 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 SMARCC2Q8TAQ2 1214 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 GPRC5CQ9NQ84 441 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 MARCH2Q9P0N8 246 aa6.67□□□□□ -1.34
CCDC66-221ENST00000487739 NTRK1P04629 796 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 THBDP07204 575 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 CACNB2Q08289 660 aaPredicted RBP6.66□□□□□ -1.34
CCDC66-221ENST00000487739 TNNI3KQ59H18 835 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 MBLAC2Q68D91 279 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 VPS37DQ86XT2 251 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 ADGRG2Q8IZP9 1017 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 ZNF526Q8TF50 670 aaPredicted RBP6.66□□□□□ -1.34
CCDC66-221ENST00000487739 MRGPRX3Q96LB0 322 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 SPATA25Q9BR10 227 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 AP5M1Q9H0R1 490 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 NKX2-4Q9H2Z4 354 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 CYP26B1Q9NR63 512 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 USP40Q9NVE5 1235 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 ACTR10Q9NZ32 417 aa6.66□□□□□ -1.34
CCDC66-221ENST00000487739 A0A1B0GTL3 188 aa6.65□□□□□ -1.34
CCDC66-221ENST00000487739 SMAD7O15105 426 aaKnown RBP6.65□□□□□ -1.34
CCDC66-221ENST00000487739 SSBP05455 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
CCDC66-221ENST00000487739 DLX2Q07687 328 aaPredicted RBP6.65□□□□□ -1.34
CCDC66-221ENST00000487739 SKOR2Q2VWA4 1001 aaPredicted RBP6.65□□□□□ -1.34
CCDC66-221ENST00000487739 IQCEQ6IPM2 695 aa6.65□□□□□ -1.34
CCDC66-221ENST00000487739 PLEKHO2Q8TD55 490 aa6.65□□□□□ -1.34
CCDC66-221ENST00000487739 CYP2C8P10632 490 aa6.64□□□□□ -1.35
CCDC66-221ENST00000487739 NT5DC1Q5TFE4 455 aa6.64□□□□□ -1.35
CCDC66-221ENST00000487739 LARP1BQ659C4 914 aaKnown RBP6.64□□□□□ -1.35
CCDC66-221ENST00000487739 C6orf15Q6UXA7 325 aaPredicted RBP6.64□□□□□ -1.35
CCDC66-221ENST00000487739 CARFQ8N187 725 aa6.64□□□□□ -1.35
CCDC66-221ENST00000487739 DPF3Q92784 378 aa6.64□□□□□ -1.35
CCDC66-221ENST00000487739 BTG4Q9NY30 223 aa6.64□□□□□ -1.35
CCDC66-221ENST00000487739 NTMQ9P121 344 aa6.64□□□□□ -1.35
CCDC66-221ENST00000487739 SIT1Q9Y3P8 196 aa6.64□□□□□ -1.35
CCDC66-221ENST00000487739 MRVI1Q9Y6F6 885 aa6.64□□□□□ -1.35
CCDC66-221ENST00000487739 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
CCDC66-221ENST00000487739 RPL11P62913 178 aaKnown RBP6.63□□□□□ -1.35
CCDC66-221ENST00000487739 GNL2Q13823 731 aaKnown RBP6.63□□□□□ -1.35
CCDC66-221ENST00000487739 INF2Q27J81 1249 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 E4F1Q66K89 784 aaPredicted RBP6.63□□□□□ -1.35
CCDC66-221ENST00000487739 ETV3LQ6ZN32 361 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 PRRT2Q7Z6L0 340 aaPredicted RBP6.63□□□□□ -1.35
CCDC66-221ENST00000487739 TEX2Q8IWB9 1127 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 FAM178BQ8IXR5 827 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 NPLOC4Q8TAT6 608 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 FRS2Q8WU20 508 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 BTN2A2Q8WVV5 523 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 NOX5Q96PH1 765 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 BDH2Q9BUT1 245 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 LGR4Q9BXB1 951 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 PCDH18Q9HCL0 1135 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 LRP2BPQ9P2M1 347 aa6.63□□□□□ -1.35
CCDC66-221ENST00000487739 C22orf46C9J442 243 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 GJA9P57773 515 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 KCNAB2Q13303 367 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 RTP5Q14D33 572 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 SV2CQ496J9 727 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 ZFYVE27Q5T4F4 411 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 TTLL7Q6ZT98 887 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 SEC14L1Q92503 715 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 ZBTB8AQ96BR9 441 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 DDX11Q96FC9 970 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
CCDC66-221ENST00000487739 TIMM13Q9Y5L4 95 aaPredicted RBP6.62□□□□□ -1.35
CCDC66-221ENST00000487739 B2RBV5 119 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 MYO1BO43795 1136 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 PRICKLE3O43900 615 aaPredicted RBP6.61□□□□□ -1.35
CCDC66-221ENST00000487739 SMARCA5O60264 1052 aaPredicted RBP6.61□□□□□ -1.35
CCDC66-221ENST00000487739 SUSD5O60279 629 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 ITGAVP06756 1048 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 C8BP07358 591 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 SNRPB2P08579 225 aaKnown RBP6.61□□□□□ -1.35
CCDC66-221ENST00000487739 HOXC12P31275 282 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 SLC6A11P48066 632 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 SARSP49591 514 aaKnown RBP6.61□□□□□ -1.35
CCDC66-221ENST00000487739 GTF2A2P52657 109 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 CYP4F3Q08477 520 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 UBXN11Q5T124 520 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 MROH9Q5TGP6 573 aa6.61□□□□□ -1.35
CCDC66-221ENST00000487739 ZNF227Q86WZ6 799 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms