RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 AP5M1Q9H0R1 490 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 PDGFCQ9NRA1 345 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
RNF220-215ENST00000487332 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
RNF220-215ENST00000487332 SNX14Q9Y5W7 946 aa11.88□□□□□ -0.51
RNF220-215ENST00000487332 CNTNAP5Q8WYK1 1306 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 GCOM1H8Y6P7 765 aaPredicted RBP11.87□□□□□ -0.51
RNF220-215ENST00000487332 STAM2O75886 525 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 PLEKHA8P1O95397 391 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 CFBP00751 764 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 POLR2MP0CAP2 368 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 CPT1AP50416 773 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
RNF220-215ENST00000487332 TTLL4Q14679 1199 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 STXBP2Q15833 593 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 TRIM60Q495X7 471 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 ARHGEF16Q5VV41 709 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 MICU3Q86XE3 530 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 SLC43A3Q8NBI5 491 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 TAAR1Q96RJ0 339 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 PDCD2LQ9BRP1 358 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 WDR11Q9BZH6 1224 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 PDLIM7Q9NR12 457 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 PRKAG2Q9UGJ0 569 aa11.87□□□□□ -0.51
RNF220-215ENST00000487332 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
RNF220-215ENST00000487332 ZBTB43O43298 467 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 EIF3JO75822 258 aaKnown RBP11.86□□□□□ -0.51
RNF220-215ENST00000487332 NR3C2P08235 984 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 CLTBP09497 229 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 MAGEA10P43363 369 aaPredicted RBP11.86□□□□□ -0.51
RNF220-215ENST00000487332 CDK7P50613 346 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 EVCP57679 992 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 FUT2Q10981 343 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 RTN1Q16799 776 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 GNASQ5JWF2 1037 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 CCDC62Q6P9F0 684 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 KCNV1Q6PIU1 500 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 EEPD1Q7L9B9 569 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 EMID1Q96A84 441 aaPredicted RBP11.86□□□□□ -0.51
RNF220-215ENST00000487332 JAKMIP1Q96N16 626 aaKnown RBP11.86□□□□□ -0.51
RNF220-215ENST00000487332 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 TM6SF1Q9BZW5 370 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
RNF220-215ENST00000487332 ATP11BQ9Y2G3 1177 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 MCM3APO60318 1980 aa11.86□□□□□ -0.51
RNF220-215ENST00000487332 CCDC196A0A1B0GTZ2 297 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 A6NJR5 290 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 GOLGA8AA7E2F4 631 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 GOLGA8BA8MQT2 603 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 ARVCFO00192 962 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 KIAA0355O15063 1070 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 DYNC1LI2O43237 492 aaPredicted RBP11.85□□□□□ -0.51
RNF220-215ENST00000487332 KPNA6O60684 536 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 SLC34A2O95436 690 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
RNF220-215ENST00000487332 PGM5Q15124 567 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 BRDTQ58F21 947 aaPredicted RBP11.85□□□□□ -0.51
RNF220-215ENST00000487332 XRRA1Q6P2D8 792 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 NOL8Q76FK4 1167 aaKnown RBP11.85□□□□□ -0.51
RNF220-215ENST00000487332 VSIG10LQ86VR7 867 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 FERMT2Q96AC1 680 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 IL17RAQ96F46 866 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 USP26Q9BXU7 913 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 BRPF3Q9ULD4 1205 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 DDX49Q9Y6V7 483 aaKnown RBP11.85□□□□□ -0.51
RNF220-215ENST00000487332 MYH6P13533 1939 aa11.85□□□□□ -0.51
RNF220-215ENST00000487332 KLF18A0A0U1RQI7 1052 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 DCDC2CA8MYV0 355 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 ARIH2O95376 493 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 TXNP10599 105 aaKnown RBP11.84□□□□□ -0.51
RNF220-215ENST00000487332 TGFB3P10600 412 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 SYN1P17600 705 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
RNF220-215ENST00000487332 RXRAP19793 462 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 CCND2P30279 289 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 ANAPC15P60006 121 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 PURAQ00577 322 aaKnown RBP11.84□□□□□ -0.51
RNF220-215ENST00000487332 TLE2Q04725 743 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 FAM126BQ8IXS8 530 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 OR6J1Q8NGC5 347 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 CUL5Q93034 780 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 TBX21Q9UL17 535 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 SMCHD1A6NHR9 2005 aa11.84□□□□□ -0.51
RNF220-215ENST00000487332 PDE4DIPQ5VU43 2346 aa11.83□□□□□ -0.51
RNF220-215ENST00000487332 MEIS2O14770 477 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 TLR3O15455 904 aaKnown RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 GH1P01241 217 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 CD4P01730 458 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 HOXD8P13378 290 aaPredicted RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 CASTP20810 708 aaKnown RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 ICAM3P32942 547 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 METAP2P50579 478 aaKnown RBP eCLIP11.83□□□□□ -0.52
RNF220-215ENST00000487332 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms