RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 CCDC173Q0VFZ6 552 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L24Q0WX57 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 MTMR2Q13614 643 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 POSTNQ15063 836 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 CALCRLQ16602 461 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 LONRF3Q496Y0 759 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 CCDC174Q6PII3 467 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L6PQ6QN14 398 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 MOXD1Q6UVY6 613 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 KRT26Q7Z3Y9 468 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 PNMA8AQ86V59 439 aaPredicted RBP7.97□□□□□ -1.13
SF3A3-206ENST00000487062 SAMD3Q8N6K7 520 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 PDILTQ8N807 584 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 RASSF8Q8NHQ8 419 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.97□□□□□ -1.13
SF3A3-206ENST00000487062 RBM46Q8TBY0 533 aaKnown RBP7.97□□□□□ -1.13
SF3A3-206ENST00000487062 ZKSCAN4Q969J2 545 aaPredicted RBP7.97□□□□□ -1.13
SF3A3-206ENST00000487062 DHX58Q96C10 678 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 EPSTI1Q96J88 318 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 C12orf42Q96LP6 360 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 PANK2Q9BZ23 570 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 CCSER1Q9C0I3 900 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 TMEM60Q9H2L4 133 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 TMOD4Q9NZQ9 345 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 CSADQ9Y600 493 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 ZHX2Q9Y6X8 837 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 PAPPA2Q9BXP8 1791 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 SSC5DA1L4H1 1573 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 PTPRFP10586 1907 aa7.96□□□□□ -1.13
SF3A3-206ENST00000487062 BECN2A8MW95 431 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 GOLGA6L19H0YKK7 550 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 GCOM1H8Y6P7 765 aaPredicted RBP7.96□□□□□ -1.14
SF3A3-206ENST00000487062 ACTN4O43707 911 aaKnown RBP7.96□□□□□ -1.14
SF3A3-206ENST00000487062 FLOT1O75955 427 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 CFBP00751 764 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 ICAM1P05362 532 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 POLR2MP0CAP2 368 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 VCAM1P19320 739 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 TPM4P67936 248 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 ARHGAP4P98171 946 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 PDIA5Q14554 519 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 USP49Q70CQ1 688 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 LDHDQ86WU2 507 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 MCF2L2Q86YR7 1114 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 TRIML1Q8N9V2 468 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 SMARCE1Q969G3 411 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 CALML4Q96GE6 196 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 DNAJC25Q9H1X3 360 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 CUEDC2Q9H467 287 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 RPAP3Q9H6T3 665 aaPredicted RBP7.96□□□□□ -1.14
SF3A3-206ENST00000487062 MAGEF1Q9HAY2 307 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 FBXO28Q9NVF7 368 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 MAP3K20Q9NYL2 800 aaKnown RBP7.96□□□□□ -1.14
SF3A3-206ENST00000487062 DDX25Q9UHL0 483 aaKnown RBP7.96□□□□□ -1.14
SF3A3-206ENST00000487062 DACH1Q9UI36 760 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 TUBE1Q9UJT0 475 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 CCPG1Q9ULG6 757 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 RABGAP1Q9Y3P9 1069 aa7.96□□□□□ -1.14
SF3A3-206ENST00000487062 COL11A1P12107 1806 aaPredicted RBP7.96□□□□□ -1.14
SF3A3-206ENST00000487062 SMCHD1A6NHR9 2005 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 CYP3A7-CYP3A51PA0A087WV96 503 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 ADM5C9JUS6 153 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 TBX3O15119 743 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 SLC26A4O43511 780 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 TDP2O95551 362 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 PRKAR2AP13861 404 aaKnown RBP7.95□□□□□ -1.14
SF3A3-206ENST00000487062 CYP3A7P24462 503 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 ZNF76P36508 570 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 SREBF1P36956 1147 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 STAT6P42226 847 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 TECP42680 631 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 TXKP42681 527 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 FXR2P51116 673 aaKnown RBP eCLIP7.95□□□□□ -1.14
SF3A3-206ENST00000487062 HMGCS2P54868 508 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 MDM2Q00987 491 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-206ENST00000487062 PNOCQ13519 176 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 PRKG1Q13976 671 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 TTLL12Q14166 644 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-206ENST00000487062 IL17AQ16552 155 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 SH3D19Q5HYK7 790 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 RRAGBQ5VZM2 374 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 CABP7Q86V35 215 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 SLFN12Q8IYM2 578 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 ANKRD13AQ8IZ07 590 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 CDCA5Q96FF9 252 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 CDK5RAP3Q96JB5 506 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 MTMR9Q96QG7 549 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 PPP1R9BQ96SB3 815 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 BPIFA3Q9BQP9 254 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 TAF1DQ9H5J8 278 aaPredicted RBP7.95□□□□□ -1.14
SF3A3-206ENST00000487062 SLC38A10Q9HBR0 1119 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 CBX8Q9HC52 389 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 DISC1Q9NRI5 854 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 LRWD1Q9UFC0 647 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 AFG3L2Q9Y4W6 797 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 PCDHA5Q9Y5H7 936 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 MYPNQ86TC9 1320 aa7.95□□□□□ -1.14
SF3A3-206ENST00000487062 RLFQ13129 1914 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms