RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CHP1Q99653 195 aa20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 TMX4Q9H1E5 349 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-207ENST00000486828 MYMKA6NI61 221 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 MPHOSPH10O00566 681 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 ZBTB5O15062 677 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 ZBTB7AO95365 584 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 CRKP46108 304 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 NFIAQ12857 509 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 MCM6Q14566 821 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 UBE2SQ16763 222 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 RABGGTAQ92696 567 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 GOLGA1Q92805 767 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 MASTLQ96GX5 879 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 SLF1Q9BQI6 1058 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 NUP58Q9BVL2 599 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 ZMYND15Q9H091 742 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 CDC23Q9UJX2 597 aa20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 EPN1Q9Y6I3 576 aaPredicted RBP20.09■□□□□ 0.81
PDLIM7-207ENST00000486828 MYH4Q9Y623 1939 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 CTAGE9A4FU28 777 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 POTEMA6NI47 508 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 NDUFA10O95299 355 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 MRPL12P52815 198 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 TSR1Q2NL82 804 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 TEX35Q5T0J7 233 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 KRT79Q5XKE5 535 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 CENPPQ6IPU0 288 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 TMCO3Q6UWJ1 677 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 SLC35F6Q8N357 371 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 RETREG2Q8NC44 543 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 RAD54LQ92698 747 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 TTYH3Q9C0H2 523 aa20.08■□□□□ 0.81
PDLIM7-207ENST00000486828 USP17L10C9JJH3 530 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 ZRANB2O95218 330 aaKnown RBP eCLIP20.08■□□□□ 0.82e-6■■■□□ 18.6
PDLIM7-207ENST00000486828 HOXA7P31268 230 aaPredicted RBP20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 SLC16A2P36021 539 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 ATP2B2Q01814 1243 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 DMTNQ08495 405 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 TMEM119Q4V9L6 283 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 ZSCAN29Q8IWY8 852 aaPredicted RBP20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 SNX29Q8TEQ0 813 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 ZDHHC15Q96MV8 337 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 SEMA6BQ9H3T3 888 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 SLC39A2Q9NP94 309 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 FHOD1Q9Y613 1164 aa20.08■□□□□ 0.8
PDLIM7-207ENST00000486828 MTIF2P46199 727 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 TBC1D8BQ0IIM8 1120 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 MEA1Q16626 185 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 UTP14CQ5TAP6 766 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 WDR59Q6PJI9 974 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 KCTD1Q719H9 257 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 PODNQ7Z5L7 613 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 SRGAP1Q7Z6B7 1085 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 CEP112Q8N8E3 955 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 HPS3Q969F9 1004 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 LRRC27Q9C0I9 530 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 DNAJC18Q9H819 358 aa20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 DDX25Q9UHL0 483 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 REXO2Q9Y3B8 237 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-207ENST00000486828 ABL1P00519 1130 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 GCFC2P16383 781 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 KIF4BQ2VIQ3 1234 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 MIIPQ5JXC2 388 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 ZFPM1Q8IX07 1006 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 NAPGQ99747 312 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 NOC4LQ9BVI4 516 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 MRIQ9BWK5 157 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 PSTPIP2Q9H939 334 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 ATF5Q9Y2D1 282 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 RASSF10A6NK89 507 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 GABPB1Q06547 395 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 EEF2KMTQ96G04 330 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 ERGIC2Q96RQ1 377 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 NAP1L4Q99733 375 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 NUDT12Q9BQG2 462 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 MTFR1LQ9H019 292 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 EPC1Q9H2F5 836 aa20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 DHX36Q9H2U1 1008 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-207ENST00000486828 SIPA1L1O43166 1804 aa20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 PNMA6AP0CW24 399 aaPredicted RBP20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 TRIM21P19474 475 aaKnown RBP20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 CHMP4BP1P59074 171 aa20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 FIGNQ5HY92 759 aa20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 DYMQ7RTS9 669 aa20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 GUF1Q8N442 669 aaKnown RBP20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 HAS1Q92839 578 aa20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 GLT8D2Q9H1C3 349 aa20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 DBNDD1Q9H9R9 158 aa20.05■□□□□ 0.8
PDLIM7-207ENST00000486828 FKBP1AP62942 108 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 ZBED6P86452 979 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 MKL1Q969V6 931 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 AGPAT5Q9NUQ2 364 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 A0A1W2PQJ5 194 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 ATP8B1O43520 1251 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 SLURP2P0DP57 97 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 EHHADHQ08426 723 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 PSMD2Q13200 908 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 FKBP15Q5T1M5 1219 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 KCNK18Q7Z418 384 aa20.04■□□□□ 0.8
PDLIM7-207ENST00000486828 DCAF4Q8WV16 495 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms