RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 POTEMA6NI47 508 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 H7C1D1 291 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 MEIS2O14770 477 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 PSMA7O14818 248 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 PPP1R2P41236 205 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 ASIC1P78348 528 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 PTPN21Q16825 1174 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 NYAP1Q6ZVC0 841 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 SV2BQ7L1I2 683 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 SNX29Q8TEQ0 813 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 HAS1Q92839 578 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 PNMA5Q96PV4 448 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 TMEM39BQ9GZU3 492 aa22.84■■□□□ 1.25
HPS3-206ENST00000486530 CYP3A7-CYP3A51PA0A087WV96 503 aa22.83■■□□□ 1.25
HPS3-206ENST00000486530 MARCH6O60337 910 aa22.83■■□□□ 1.25
HPS3-206ENST00000486530 CYP3A7P24462 503 aa22.83■■□□□ 1.25
HPS3-206ENST00000486530 E4F1Q66K89 784 aaPredicted RBP22.83■■□□□ 1.25
HPS3-206ENST00000486530 FHDC1Q9C0D6 1143 aaPredicted RBP22.83■■□□□ 1.25
HPS3-206ENST00000486530 BLOC1S4Q9NUP1 217 aa22.83■■□□□ 1.25
HPS3-206ENST00000486530 ATAD5Q96QE3 1844 aa22.83■■□□□ 1.25
HPS3-206ENST00000486530 CCP110O43303 1012 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 GMPSP49915 693 aaPredicted RBP22.83■■□□□ 1.24
HPS3-206ENST00000486530 STAT2P52630 851 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 TRAF1Q13077 416 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 PTPN14Q15678 1187 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 TMEM119Q4V9L6 283 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 TEX2Q8IWB9 1127 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 CDAN1Q8IWY9 1227 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 LARP4BQ92615 738 aaKnown RBP22.83■■□□□ 1.24
HPS3-206ENST00000486530 DHTKD1Q96HY7 919 aaPredicted RBP22.83■■□□□ 1.24
HPS3-206ENST00000486530 MBOAT7Q96N66 472 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 MAPK8IP1Q9UQF2 711 aa22.83■■□□□ 1.24
HPS3-206ENST00000486530 LRRC10BA6NIK2 292 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 KIF2AO00139 706 aaPredicted RBP22.82■■□□□ 1.24
HPS3-206ENST00000486530 DYNC1I1O14576 645 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 EGFRP00533 1210 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 FOSP01100 380 aaPredicted RBP22.82■■□□□ 1.24
HPS3-206ENST00000486530 PBX1P40424 430 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 ECE1P42892 770 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 PDE4DQ08499 809 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 KRT31Q15323 416 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 LRRC27Q9C0I9 530 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 TRMT1Q9NXH9 659 aaKnown RBP22.82■■□□□ 1.24
HPS3-206ENST00000486530 PRR12Q9ULL5 1215 aa22.82■■□□□ 1.24
HPS3-206ENST00000486530 TEX33O43247 280 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 SLC26A4O43511 780 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 GTF2F1P35269 517 aaKnown RBP eCLIP22.81■■□□□ 1.24
HPS3-206ENST00000486530 SNAP25P60880 206 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 USH1GQ495M9 461 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 COBLL1Q53SF7 1204 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 TCP11X2Q5H9J9 407 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 CNNM4Q6P4Q7 775 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 FCHSD1Q86WN1 690 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 SPICE1Q8N0Z3 855 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 CRYGNQ8WXF5 182 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 RAD54LQ92698 747 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 SH2D4AQ9H788 454 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 PCDHA12Q9UN75 941 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 PAXBP1Q9Y5B6 917 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 ITIH6Q6UXX5 1313 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 KDM3AQ9Y4C1 1321 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 KCNJ18B7U540 433 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 COBLO75128 1261 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 KCNJ12Q14500 433 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 CEP135Q66GS9 1140 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 TC2NQ8N9U0 490 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 ACER1Q8TDN7 264 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 KCNMB3Q9NPA1 279 aa22.81■■□□□ 1.24
HPS3-206ENST00000486530 SPDYE3A6NKU9 549 aa22.8■■□□□ 1.24
HPS3-206ENST00000486530 ARHGAP6O43182 974 aa22.8■■□□□ 1.24
HPS3-206ENST00000486530 HOXA7P31268 230 aaPredicted RBP22.8■■□□□ 1.24
HPS3-206ENST00000486530 ARHGAP4P98171 946 aa22.8■■□□□ 1.24
HPS3-206ENST00000486530 MAP3K10Q02779 954 aa22.8■■□□□ 1.24
HPS3-206ENST00000486530 TMEM139Q8IV31 216 aa22.8■■□□□ 1.24
HPS3-206ENST00000486530 NOC3LQ8WTT2 800 aaKnown RBP22.8■■□□□ 1.24
HPS3-206ENST00000486530 PPP1R13BQ96KQ4 1090 aa22.8■■□□□ 1.24
HPS3-206ENST00000486530 THAP9Q9H5L6 903 aa22.8■■□□□ 1.24
HPS3-206ENST00000486530 CNOT7Q9UIV1 285 aaKnown RBP22.8■■□□□ 1.24
HPS3-206ENST00000486530 GJA3Q9Y6H8 435 aa22.8■■□□□ 1.24
HPS3-206ENST00000486530 PVALEFA0A1B0GWK0 134 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 BICDL2A1A5D9 508 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 CAP2P40123 477 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 COPB1P53618 953 aaKnown RBP22.79■■□□□ 1.24
HPS3-206ENST00000486530 GOLGA8FQ08AF8 430 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 GOLGA8DPQ0D2H9 430 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 MCM6Q14566 821 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 HYIQ5T013 277 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 MICALL2Q8IY33 904 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 SLFN12Q8IYM2 578 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 BAG1Q99933 345 aaPredicted RBP22.79■■□□□ 1.24
HPS3-206ENST00000486530 NT5C3AQ9H0P0 336 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 TRIM49BA6NDI0 452 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 STX10O60499 249 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 SREBF1P36956 1147 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 UNC13DQ70J99 1090 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 TRIM47Q96LD4 638 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 VCPKMTQ9H867 229 aa22.79■■□□□ 1.24
HPS3-206ENST00000486530 ZNF541Q9H0D2 1346 aa22.78■■□□□ 1.24
HPS3-206ENST00000486530 AKR1B15C9JRZ8 316 aaPredicted RBP22.78■■□□□ 1.24
HPS3-206ENST00000486530 PIK3CDO00329 1044 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms