RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 KCNQ1P51787 676 aa20.59■□□□□ 0.89
MCF2L-226ENST00000486210 RRP12Q5JTH9 1297 aaKnown RBP20.59■□□□□ 0.89
MCF2L-226ENST00000486210 MFSD6Q6ZSS7 791 aa20.59■□□□□ 0.89
MCF2L-226ENST00000486210 MORC4Q8TE76 937 aa20.59■□□□□ 0.89
MCF2L-226ENST00000486210 KCNB2Q92953 911 aa20.59■□□□□ 0.89
MCF2L-226ENST00000486210 TRMT13Q9NUP7 481 aaKnown RBP20.59■□□□□ 0.89
MCF2L-226ENST00000486210 STX8Q9UNK0 236 aa20.59■□□□□ 0.89
MCF2L-226ENST00000486210 TANC1Q9C0D5 1861 aa20.58■□□□□ 0.89
MCF2L-226ENST00000486210 LAMA4Q16363 1823 aa20.58■□□□□ 0.89
MCF2L-226ENST00000486210 EPOPA6NHQ4 379 aa20.58■□□□□ 0.89
MCF2L-226ENST00000486210 ORC4O43929 436 aa20.58■□□□□ 0.89
MCF2L-226ENST00000486210 CYP2C9P11712 490 aa20.58■□□□□ 0.89
MCF2L-226ENST00000486210 COL9A3Q14050 684 aaPredicted RBP20.58■□□□□ 0.89
MCF2L-226ENST00000486210 KCTD1Q719H9 257 aa20.58■□□□□ 0.89
MCF2L-226ENST00000486210 TSPYL2Q9H2G4 693 aaPredicted RBP20.58■□□□□ 0.89
MCF2L-226ENST00000486210 TOMM22Q9NS69 142 aa20.58■□□□□ 0.89
MCF2L-226ENST00000486210 MTCH2Q9Y6C9 303 aa20.58■□□□□ 0.89
MCF2L-226ENST00000486210 PTPRSQ13332 1948 aa20.58■□□□□ 0.88
MCF2L-226ENST00000486210 BDP1A6H8Y1 2624 aa20.57■□□□□ 0.88
MCF2L-226ENST00000486210 SCN10AQ9Y5Y9 1956 aa20.57■□□□□ 0.88
MCF2L-226ENST00000486210 PLA2G6O60733 806 aa20.57■□□□□ 0.88
MCF2L-226ENST00000486210 CA3P07451 260 aa20.57■□□□□ 0.88
MCF2L-226ENST00000486210 POU3F3P20264 500 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-226ENST00000486210 RNF41Q9H4P4 317 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-226ENST00000486210 VTA1Q9NP79 307 aa20.57■□□□□ 0.88
MCF2L-226ENST00000486210 PRR12Q9ULL5 1215 aa20.57■□□□□ 0.88
MCF2L-226ENST00000486210 SNX14Q9Y5W7 946 aa20.57■□□□□ 0.88
MCF2L-226ENST00000486210 B4E1Z4 1266 aa20.56■□□□□ 0.88
MCF2L-226ENST00000486210 RANBP6O60518 1105 aaKnown RBP20.56■□□□□ 0.88
MCF2L-226ENST00000486210 ARHGEF15O94989 841 aa20.56■□□□□ 0.88
MCF2L-226ENST00000486210 ADCK5Q3MIX3 580 aa20.56■□□□□ 0.88
MCF2L-226ENST00000486210 DUSP28Q4G0W2 176 aa20.56■□□□□ 0.88
MCF2L-226ENST00000486210 RNF20Q5VTR2 975 aa20.56■□□□□ 0.88
MCF2L-226ENST00000486210 DEFB128Q7Z7B8 93 aa20.56■□□□□ 0.88
MCF2L-226ENST00000486210 CERS4Q9HA82 394 aa20.56■□□□□ 0.88
MCF2L-226ENST00000486210 TNKSO95271 1327 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 EIF5BO60841 1220 aaKnown RBP20.55■□□□□ 0.88
MCF2L-226ENST00000486210 PFKMP08237 780 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 PCP11498 1178 aaKnown RBP20.55■□□□□ 0.88
MCF2L-226ENST00000486210 PURAQ00577 322 aaKnown RBP20.55■□□□□ 0.88
MCF2L-226ENST00000486210 TSGA10IPQ3SY00 556 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 TMEM67Q5HYA8 995 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 KRT40Q6A162 431 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 RCSD1Q6JBY9 416 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 NSMFQ6X4W1 530 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 TET1Q8NFU7 2136 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 FAM122AQ96E09 287 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 IL17RBQ9NRM6 502 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 TRANK1O15050 2925 aa20.55■□□□□ 0.88
MCF2L-226ENST00000486210 NMT2O60551 498 aa20.54■□□□□ 0.88
MCF2L-226ENST00000486210 KDM4AO75164 1064 aa20.54■□□□□ 0.88
MCF2L-226ENST00000486210 CCDC96Q2M329 555 aa20.54■□□□□ 0.88
MCF2L-226ENST00000486210 CYB5R4Q7L1T6 521 aa20.54■□□□□ 0.88
MCF2L-226ENST00000486210 PPP1R13LQ8WUF5 828 aa20.54■□□□□ 0.88
MCF2L-226ENST00000486210 C1QTNF1Q9BXJ1 281 aa20.54■□□□□ 0.88
MCF2L-226ENST00000486210 COL4A4P53420 1690 aaPredicted RBP20.54■□□□□ 0.88
MCF2L-226ENST00000486210 SUPT20HL2P0C7V6 817 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 ALDH5A1P51649 535 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-226ENST00000486210 SKIV2LQ15477 1246 aaKnown RBP20.53■□□□□ 0.88
MCF2L-226ENST00000486210 AAK1Q2M2I8 961 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 ESR2Q92731 530 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 WDR11Q9BZH6 1224 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 KRT23Q9C075 422 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 POLR3EQ9NVU0 708 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 ZSWIM5Q9P217 1185 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 CCPG1Q9ULG6 757 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
MCF2L-226ENST00000486210 RBM47A0AV96 593 aaKnown RBP20.52■□□□□ 0.88
MCF2L-226ENST00000486210 ICAM1P05362 532 aa20.52■□□□□ 0.88
MCF2L-226ENST00000486210 BAATQ14032 418 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-226ENST00000486210 MB21D2Q8IYB1 491 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-226ENST00000486210 NCOA7Q8NI08 942 aa20.52■□□□□ 0.88
MCF2L-226ENST00000486210 ZKSCAN3Q9BRR0 538 aa20.52■□□□□ 0.88
MCF2L-226ENST00000486210 RANBP17Q9H2T7 1088 aaKnown RBP20.52■□□□□ 0.88
MCF2L-226ENST00000486210 EPHX3Q9H6B9 360 aa20.52■□□□□ 0.88
MCF2L-226ENST00000486210 CNNM2Q9H8M5 875 aa20.52■□□□□ 0.88
MCF2L-226ENST00000486210 TRIP12Q14669 1992 aaPredicted RBP20.52■□□□□ 0.87
MCF2L-226ENST00000486210 NFIBO00712 420 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 MYL3P08590 195 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 NOVP48745 357 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 TAP1Q03518 808 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 TRDNQ13061 729 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 TTBK2Q6IQ55 1244 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 CHST3Q7LGC8 479 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 SPRED2Q7Z698 418 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 DCAF4Q8WV16 495 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 SLC9A7Q96T83 725 aa20.51■□□□□ 0.87
MCF2L-226ENST00000486210 GTPBP6O43824 516 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-226ENST00000486210 TLL1O43897 1013 aa20.5■□□□□ 0.87
MCF2L-226ENST00000486210 IQCF3P0C7M6 154 aa20.5■□□□□ 0.87
MCF2L-226ENST00000486210 CPA1P15085 419 aa20.5■□□□□ 0.87
MCF2L-226ENST00000486210 HOXD11P31277 338 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-226ENST00000486210 ANTXR2P58335 489 aa20.5■□□□□ 0.87
MCF2L-226ENST00000486210 NBPF20Q3BBV1 942 aa20.5■□□□□ 0.87
MCF2L-226ENST00000486210 RALYLQ86SE5 291 aaKnown RBP20.5■□□□□ 0.87
MCF2L-226ENST00000486210 OR6J1Q8NGC5 347 aa20.5■□□□□ 0.87
MCF2L-226ENST00000486210 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
MCF2L-226ENST00000486210 NEK1Q96PY6 1258 aa20.5■□□□□ 0.87
MCF2L-226ENST00000486210 MTG1Q9BT17 334 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-226ENST00000486210 C22orf23Q9BZE7 217 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms