RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RTN1Q16799 776 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 OTUD7BQ6GQQ9 843 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 APOA5Q6Q788 366 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 CMTR1Q8N1G2 835 aaKnown RBP6.55□□□□□ -1.36
COPS3-208ENST00000486032 STAG2Q8N3U4 1231 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 NECAB1Q8N987 351 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 GMCL1P1Q8NEA9 526 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 DCAF4Q8WV16 495 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 MKL1Q969V6 931 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 PAGR1Q9BTK6 254 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
COPS3-208ENST00000486032 FBXO28Q9NVF7 368 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 TPCN1Q9ULQ1 816 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 AGTPBP1Q9UPW5 1226 aa6.55□□□□□ -1.36
COPS3-208ENST00000486032 LOC285556D6RIA3 1793 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 HTTP42858 3142 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 KRBA1A5PL33 1030 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L15C9J2P7 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L13C9JLJ4 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L11C9JVI0 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 KLRF2D3W0D1 207 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L18D6R9N7 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L22D6RA61 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L17D6RBQ6 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L19D6RCP7 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L20D6RJB6 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 HOXA2O43364 376 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 DDAH1O94760 285 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 PLEKHA8P1O95397 391 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 LARGE1O95461 756 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CALM1P0DP23 149 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CALM2P0DP24 149 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CALM3P0DP25 149 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CYP2C8P10632 490 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CTGFP29279 349 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 ADD1P35611 737 aaKnown RBP6.54□□□□□ -1.36
COPS3-208ENST00000486032 MAP2K2P36507 400 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 NOVP48745 357 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 USP17L24Q0WX57 530 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 KCNH2Q12809 1159 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 PABPC4Q13310 644 aaKnown RBP eCLIP6.54□□□□□ -1.361e-6■□□□□ 9.5
COPS3-208ENST00000486032 PLS1Q14651 629 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 GRM4Q14833 912 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 TAF1CQ15572 869 aaPredicted RBP6.54□□□□□ -1.36
COPS3-208ENST00000486032 SH3D19Q5HYK7 790 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CCDC174Q6PII3 467 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CATSPERGQ6ZRH7 1159 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 SGMS1Q86VZ5 419 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 HOMER1Q86YM7 354 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CCDC83Q8IWF9 413 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 CPXCR1Q8N123 301 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 PROCA1Q8NCQ7 364 aaPredicted RBP6.54□□□□□ -1.36
COPS3-208ENST00000486032 SMCR8Q8TEV9 937 aaPredicted RBP6.54□□□□□ -1.36
COPS3-208ENST00000486032 ANKS1AQ92625 1134 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 LPAR1Q92633 364 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 ATG4CQ96DT6 458 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 C12orf42Q96LP6 360 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 PHOX2BQ99453 314 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 P2RX7Q99572 595 aaKnown RBP6.54□□□□□ -1.36
COPS3-208ENST00000486032 MTA3Q9BTC8 594 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 ASCC2Q9H1I8 757 aaPredicted RBP6.54□□□□□ -1.36
COPS3-208ENST00000486032 NCOA5Q9HCD5 579 aaKnown RBP6.54□□□□□ -1.36
COPS3-208ENST00000486032 LIMCH1Q9UPQ0 1083 aa6.54□□□□□ -1.36
COPS3-208ENST00000486032 hCG_1642624A0A1W2PR95 340 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 CPLX1O14810 134 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 TAL1P17542 331 aaPredicted RBP6.53□□□□□ -1.36
COPS3-208ENST00000486032 PDIA3P30101 505 aaKnown RBP6.53□□□□□ -1.36
COPS3-208ENST00000486032 CDC27P30260 824 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 KIF5BP33176 963 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 TM4SF4P48230 202 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 STAT2P52630 851 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 INHBEP58166 350 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 ZNF543Q08ER8 600 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 SCRN1Q12765 414 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 TROAPQ12815 778 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 CRHR2Q13324 411 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 COG2Q14746 738 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 ME3Q16798 604 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 PTPRNQ16849 979 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 ASPRV1Q53RT3 343 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 GPATCH4Q5T3I0 446 aaKnown RBP6.53□□□□□ -1.36
COPS3-208ENST00000486032 SYDE2Q5VT97 1194 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 WDR78Q5VTH9 848 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 ANKRD23Q86SG2 305 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 FAM160B2Q86V87 743 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 HSCBQ8IWL3 235 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 FANCBQ8NB91 859 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 SPRYD3Q8NCJ5 442 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 CHURC1Q8WUH1 139 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 BBXQ8WY36 941 aaPredicted RBP6.53□□□□□ -1.36
COPS3-208ENST00000486032 IL17RAQ96F46 866 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 GMCL1Q96IK5 515 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 SLF1Q9BQI6 1058 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 BEGAINQ9BUH8 593 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 SLC26A6Q9BXS9 759 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 ARHGAP39Q9C0H5 1083 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 GOLGA2P5Q9HBQ8 144 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 ZFYVE28Q9HCC9 887 aa6.53□□□□□ -1.36
COPS3-208ENST00000486032 CWC22Q9HCG8 908 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms