RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 FUT2Q10981 343 aa14.36□□□□□ -0.11
HMG20B-211ENST00000486028 TOB2Q14106 344 aaPredicted RBP14.36□□□□□ -0.11
HMG20B-211ENST00000486028 C8orf34Q49A92 452 aa14.36□□□□□ -0.11
HMG20B-211ENST00000486028 GJC2Q5T442 439 aaPredicted RBP14.36□□□□□ -0.11
HMG20B-211ENST00000486028 RNF180Q86T96 592 aa14.36□□□□□ -0.11
HMG20B-211ENST00000486028 FBXO16Q8IX29 292 aaPredicted RBP14.36□□□□□ -0.11
HMG20B-211ENST00000486028 DPF3Q92784 378 aa14.36□□□□□ -0.11
HMG20B-211ENST00000486028 CUL5Q93034 780 aa14.36□□□□□ -0.11
HMG20B-211ENST00000486028 IL17RAQ96F46 866 aa14.36□□□□□ -0.11
HMG20B-211ENST00000486028 SPC25Q9HBM1 224 aa14.36□□□□□ -0.11
HMG20B-211ENST00000486028 COL20A1Q9P218 1284 aa14.36□□□□□ -0.11
HMG20B-211ENST00000486028 RBM19Q9Y4C8 960 aaKnown RBP14.36□□□□□ -0.11
HMG20B-211ENST00000486028 DDX49Q9Y6V7 483 aaKnown RBP14.36□□□□□ -0.11
HMG20B-211ENST00000486028 MKI67P46013 3256 aaKnown RBP14.35□□□□□ -0.11
HMG20B-211ENST00000486028 PGK1P00558 417 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 HOXA13P31271 388 aaPredicted RBP14.35□□□□□ -0.11
HMG20B-211ENST00000486028 LRRC41Q15345 812 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 TAPT1Q6NXT6 567 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 HEATR3Q7Z4Q2 680 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 FCHSD1Q86WN1 690 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 HS6ST3Q8IZP7 471 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 ZNF274Q96GC6 653 aaPredicted RBP14.35□□□□□ -0.11
HMG20B-211ENST00000486028 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 PXMP2Q9NR77 195 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 PDGFCQ9NRA1 345 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 CNTNAP5Q8WYK1 1306 aa14.35□□□□□ -0.11
HMG20B-211ENST00000486028 MCM3APO60318 1980 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 TNRC18O15417 2968 aaPredicted RBP14.34□□□□□ -0.11
HMG20B-211ENST00000486028 TULP1O00294 542 aaPredicted RBP14.34□□□□□ -0.11
HMG20B-211ENST00000486028 COL6A1P12109 1028 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 EIF2AK2P19525 551 aaKnown RBP14.34□□□□□ -0.11
HMG20B-211ENST00000486028 ADCYAP1R1P41586 468 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 ANKRD1Q15327 319 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 STXBP2Q15833 593 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 LENG1Q96BZ8 264 aaPredicted RBP14.34□□□□□ -0.11
HMG20B-211ENST00000486028 WDR11Q9BZH6 1224 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 SENP6Q9GZR1 1112 aaPredicted RBP14.34□□□□□ -0.11
HMG20B-211ENST00000486028 AP5M1Q9H0R1 490 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 ALDH8A1Q9H2A2 487 aaPredicted RBP14.34□□□□□ -0.11
HMG20B-211ENST00000486028 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 RBM27Q9P2N5 1060 aaKnown RBP14.34□□□□□ -0.11
HMG20B-211ENST00000486028 NID2Q14112 1375 aa14.34□□□□□ -0.11
HMG20B-211ENST00000486028 RBM47A0AV96 593 aaKnown RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 hCG_1984214I3L0E3 225 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 PIK3CDO00329 1044 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 EIF3JO75822 258 aaKnown RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 NR3C2P08235 984 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 GJA9P57773 515 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 CCT2P78371 535 aaKnown RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 AKAP17AQ02040 695 aaKnown RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 ZNF713Q8N859 430 aaPredicted RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 SMARCC2Q8TAQ2 1214 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 SCFD2Q8WU76 684 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 GPKOWQ92917 476 aaPredicted RBP eCLIP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 LARP6Q9BRS8 491 aaKnown RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 TSEN34Q9BSV6 310 aaKnown RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 UPF3AQ9H1J1 476 aaKnown RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 GNEQ9Y223 722 aaKnown RBP14.33□□□□□ -0.12
HMG20B-211ENST00000486028 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 Q9Y3F1 56 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 SYNRGQ9UMZ2 1314 aa14.33□□□□□ -0.12
HMG20B-211ENST00000486028 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.32□□□□□ -0.12
HMG20B-211ENST00000486028 DYNC1LI2O43237 492 aaPredicted RBP14.32□□□□□ -0.12
HMG20B-211ENST00000486028 ADCY6O43306 1168 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 PRPF3O43395 683 aaKnown RBP14.32□□□□□ -0.12
HMG20B-211ENST00000486028 EVI5O60447 810 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 ADAMTS4O75173 837 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 C6orf222P0C671 652 aaPredicted RBP14.32□□□□□ -0.12
HMG20B-211ENST00000486028 IFNAR1P17181 557 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 SMPD1P17405 629 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 NAPAP54920 295 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 PFKFB3Q16875 520 aaPredicted RBP14.32□□□□□ -0.12
HMG20B-211ENST00000486028 DUSP28Q4G0W2 176 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 WWC2Q6AWC2 1192 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 CPLX2Q6PUV4 134 aaKnown RBP14.32□□□□□ -0.12
HMG20B-211ENST00000486028 VSIG10LQ86VR7 867 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 KLHDC9Q8NEP7 349 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 PDCD2LQ9BRP1 358 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 NCOA5Q9HCD5 579 aaKnown RBP14.32□□□□□ -0.12
HMG20B-211ENST00000486028 BARHL2Q9NY43 387 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 PHF24Q9UPV7 400 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 NR2E3Q9Y5X4 410 aa14.32□□□□□ -0.12
HMG20B-211ENST00000486028 MEIS2O14770 477 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 CPLX1O14810 134 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 NKRFO15226 690 aaKnown RBP eCLIP14.31□□□□□ -0.12
HMG20B-211ENST00000486028 MYCLP12524 364 aaPredicted RBP14.31□□□□□ -0.12
HMG20B-211ENST00000486028 SCG2P13521 617 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 CST5P28325 142 aaPredicted RBP14.31□□□□□ -0.12
HMG20B-211ENST00000486028 CCND2P30279 289 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 NEK4P51957 841 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 NKX3-2P78367 333 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 KCNA10Q16322 511 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 PPP1R18Q6NYC8 613 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 USP17L6PQ6QN14 398 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 TLK2Q86UE8 772 aa14.31□□□□□ -0.12
HMG20B-211ENST00000486028 PCSK9Q8NBP7 692 aaKnown RBP14.31□□□□□ -0.12
HMG20B-211ENST00000486028 GLT8D2Q9H1C3 349 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms