RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 CCDC96Q2M329 555 aa18.22■□□□□ 0.51
PLXNB3-208ENST00000485980 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
PLXNB3-208ENST00000485980 RASGRP2Q7LDG7 609 aa18.22■□□□□ 0.51
PLXNB3-208ENST00000485980 CCDC136Q96JN2 1154 aa18.22■□□□□ 0.51
PLXNB3-208ENST00000485980 ZBED2Q9BTP6 218 aa18.22■□□□□ 0.51
PLXNB3-208ENST00000485980 RAD50Q92878 1312 aa18.22■□□□□ 0.51
PLXNB3-208ENST00000485980 NMT2O60551 498 aa18.21■□□□□ 0.51
PLXNB3-208ENST00000485980 ICAM1P05362 532 aa18.21■□□□□ 0.51
PLXNB3-208ENST00000485980 SLC16A2P36021 539 aa18.21■□□□□ 0.51
PLXNB3-208ENST00000485980 PDE1AP54750 535 aa18.21■□□□□ 0.51
PLXNB3-208ENST00000485980 NFRKBQ6P4R8 1299 aa18.21■□□□□ 0.51
PLXNB3-208ENST00000485980 PI4K2BQ8TCG2 481 aa18.21■□□□□ 0.51
PLXNB3-208ENST00000485980 SEC62Q99442 399 aaKnown RBP18.21■□□□□ 0.51
PLXNB3-208ENST00000485980 LCTP09848 1927 aa18.21■□□□□ 0.51
PLXNB3-208ENST00000485980 TET1Q8NFU7 2136 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 RBM47A0AV96 593 aaKnown RBP18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 NFIBO00712 420 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 KPNA6O60684 536 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 LPXNO60711 386 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 BAIAP3O94812 1187 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 CALML3P27482 149 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 PDE4DQ08499 809 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 PPP2R5BQ15173 497 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 TMCO2Q7Z6W1 182 aaPredicted RBP18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 GDPD5Q8WTR4 605 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 COPS5Q92905 334 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 C11orf16Q9NQ32 467 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 INCENPQ9NQS7 918 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 MTUS1Q9ULD2 1270 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 TRIP12Q14669 1992 aaPredicted RBP18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
PLXNB3-208ENST00000485980 LCHNA4D1U4 455 aa18.19■□□□□ 0.5
PLXNB3-208ENST00000485980 CTDSPL2Q05D32 466 aa18.19■□□□□ 0.5
PLXNB3-208ENST00000485980 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
PLXNB3-208ENST00000485980 CD320Q9NPF0 282 aa18.19■□□□□ 0.5
PLXNB3-208ENST00000485980 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
PLXNB3-208ENST00000485980 SCN10AQ9Y5Y9 1956 aa18.19■□□□□ 0.5
PLXNB3-208ENST00000485980 TRIM6-TRIM34B2RNG4 842 aa18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 PI4K2BG5E9Z4 385 aa18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 NKRFO15226 690 aaKnown RBP eCLIP18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 RANBP6O60518 1105 aaKnown RBP18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 PTPN11Q06124 597 aaPredicted RBP18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 PTGISQ16647 500 aa18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 SLC30A10Q6XR72 485 aa18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 ALYREFQ86V81 257 aaKnown RBP18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 CCDC155Q8N6L0 562 aa18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 MPHOSPH6Q99547 160 aaKnown RBP18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 RANBP17Q9H2T7 1088 aaKnown RBP18.18■□□□□ 0.5
PLXNB3-208ENST00000485980 BRWD1Q9NSI6 2320 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 A6NJR5 290 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 TXNP10599 105 aaKnown RBP18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 WDR5P61964 334 aaKnown RBP18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 SYDE2Q5VT97 1194 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 RNF207Q6ZRF8 634 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 SCFD2Q8WU76 684 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 DCAF4Q8WV16 495 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 EVI5LQ96CN4 794 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 GPCPD1Q9NPB8 672 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 LMCD1Q9NZU5 365 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 MUC6Q6W4X9 2439 aa18.17■□□□□ 0.5
PLXNB3-208ENST00000485980 TANC1Q9C0D5 1861 aa18.16■□□□□ 0.5
PLXNB3-208ENST00000485980 CENPQQ7L2Z9 268 aaPredicted RBP18.16■□□□□ 0.5
PLXNB3-208ENST00000485980 UIMC1Q96RL1 719 aa18.16■□□□□ 0.5
PLXNB3-208ENST00000485980 FRMPD2Q68DX3 1309 aaPredicted RBP18.16■□□□□ 0.5
PLXNB3-208ENST00000485980 COL4A4P53420 1690 aaPredicted RBP18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 SSTR3P32745 418 aaPredicted RBP18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 DEFB103AP81534 67 aa18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 GJD3Q8N144 294 aa18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 AFAP1L1Q8TED9 768 aa18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 RILPL2Q969X0 211 aa18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 UBE2ZQ9H832 354 aaPredicted RBP18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 SUGCTQ9HAC7 445 aa18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 TOMM22Q9NS69 142 aa18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.15■□□□□ 0.5
PLXNB3-208ENST00000485980 PTPRSQ13332 1948 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 B4DLN1 442 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 SELPP16109 830 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 KCNA5P22460 613 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 MRPL12P52815 198 aaKnown RBP18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 RPS6P62753 249 aaKnown RBP18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 GDF6Q6KF10 455 aaPredicted RBP18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 FAM117BQ6P1L5 589 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 BTNL9Q6UXG8 535 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 LRRC8DQ7L1W4 858 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 PLEKHM2Q8IWE5 1019 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 CLEC4DQ8WXI8 215 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 TGS1Q96RS0 853 aaKnown RBP18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 RAD9AQ99638 391 aa18.14■□□□□ 0.49
PLXNB3-208ENST00000485980 GPNMBQ14956 572 aa18.13■□□□□ 0.49
PLXNB3-208ENST00000485980 CNKSR3Q6P9H4 555 aa18.13■□□□□ 0.49
PLXNB3-208ENST00000485980 CHST3Q7LGC8 479 aa18.13■□□□□ 0.49
PLXNB3-208ENST00000485980 AFG1LQ8WV93 481 aa18.13■□□□□ 0.49
PLXNB3-208ENST00000485980 OSBPL3Q9H4L5 887 aa18.13■□□□□ 0.49
PLXNB3-208ENST00000485980 PIEZO1Q92508 2521 aa18.13■□□□□ 0.49
PLXNB3-208ENST00000485980 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
PLXNB3-208ENST00000485980 PRR33A8MZF0 331 aa18.12■□□□□ 0.49
PLXNB3-208ENST00000485980 ARIH2O95376 493 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms