RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 HOMER2Q9NSB8 354 aa6.25□□□□□ -1.41
SPTLC3-206ENST00000485952 SLAMF8Q9P0V8 285 aa6.25□□□□□ -1.41
SPTLC3-206ENST00000485952 NDOR1Q9UHB4 597 aa6.25□□□□□ -1.41
SPTLC3-206ENST00000485952 DNMBPQ6XZF7 1577 aa6.25□□□□□ -1.41
SPTLC3-206ENST00000485952 POLA1P09884 1462 aaPredicted RBP6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 GAPVD1Q14C86 1478 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 AQP7O14520 342 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 MED26O95402 600 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 PARNO95453 639 aaKnown RBP6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 NAT1P18440 290 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 ITGB7P26010 798 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 TESK1Q15569 626 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 HLA-DQA1Q5Y7H0 255 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 DENND5AQ6IQ26 1287 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 STYK1Q6J9G0 422 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 CNNM4Q6P4Q7 775 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 RSPO2Q6UXX9 243 aaPredicted RBP6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 ZNF574Q6ZN55 896 aaPredicted RBP6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 BRAPQ7Z569 592 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 SPRED2Q7Z698 418 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 FGD2Q7Z6J4 655 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 ALPK1Q96QP1 1244 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 MMP19Q99542 508 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 ZFYVE21Q9BQ24 234 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 PCMTD2Q9NV79 361 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 ERVK13-1Q9NX77 482 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 TNFRSF10DQ9UBN6 386 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 ZNF281Q9Y2X9 895 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 CHD1O14646 1710 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 CLASP1Q7Z460 1538 aa6.24□□□□□ -1.41
SPTLC3-206ENST00000485952 SYNJ1O43426 1573 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 MAGI1Q96QZ7 1491 aaPredicted RBP6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 MYO1BO43795 1136 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 ADAM23O75077 832 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 EYA4O95677 639 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 WNT11O96014 354 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 LAPTM5Q13571 262 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 SLC23A3Q6PIS1 610 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 ZPBP2Q6X784 338 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 STRA8Q7Z7C7 330 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 FERMT3Q86UX7 667 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 AGBL5Q8NDL9 886 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 MAP6Q96JE9 813 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 PHF20Q9BVI0 1012 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 MTFR1LQ9H019 292 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 GPR27Q9NS67 375 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 TMEM59LQ9UK28 342 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 TNPO3Q9Y5L0 923 aaKnown RBP6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 NPFFR2Q9Y5X5 522 aa6.23□□□□□ -1.41
SPTLC3-206ENST00000485952 GRIN2BQ13224 1484 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 ASLP04424 464 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 FUT4P22083 530 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 KIR2DL1P43626 348 aaPredicted RBP6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 KIR2DL2P43627 348 aaPredicted RBP6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 ZNF460Q14592 562 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 CT47A1Q5JQC4 288 aaPredicted RBP6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 SPPL2CQ8IUH8 684 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 TP53INP2Q8IXH6 220 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 IFNL3Q8IZI9 196 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 PPM1KQ8N3J5 372 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 ANKS4BQ8N8V4 417 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 PI4K2BQ8TCG2 481 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 LINC01599Q8WXQ3 324 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 ADAMTS10Q9H324 1103 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 ASXL2Q76L83 1435 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 SYNJ2O15056 1496 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 SNAPC4Q5SXM2 1469 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 RAD54L2Q9Y4B4 1467 aa6.22□□□□□ -1.41
SPTLC3-206ENST00000485952 TCRBV16S1A1N1A0A5B0 115 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 ARNTLO00327 626 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 NPHS1O60500 1241 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 NPTXRO95502 500 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 ZGLP1P0C6A0 271 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 PMLP29590 882 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 GTF2A2P52657 109 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 GPR85P60893 370 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 EXOSC10Q01780 885 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 CHRNEQ04844 493 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 PCBP1Q15365 356 aaKnown RBP eCLIP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 BRDTQ58F21 947 aaPredicted RBP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 RALGPS1Q5JS13 557 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 KCNT2Q6UVM3 1135 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 DDX46Q7L014 1031 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 MTDHQ86UE4 582 aaKnown RBP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 CPNE8Q86YQ8 564 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 CCDC103Q8IW40 242 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 AHI1Q8N157 1196 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 OXR1Q8N573 874 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 MAGEB10Q96LZ2 347 aaPredicted RBP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 ALG1Q9BT22 464 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 PAK6Q9NQU5 681 aaPredicted RBP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 TMEFF2Q9UIK5 374 aaPredicted RBP6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 MCM8Q9UJA3 840 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 TRAF6Q9Y4K3 522 aa6.21□□□□□ -1.42
SPTLC3-206ENST00000485952 A0A1W2PQ27 194 aa6.2□□□□□ -1.42
SPTLC3-206ENST00000485952 A0A1W2PQ45 241 aaPredicted RBP6.2□□□□□ -1.42
SPTLC3-206ENST00000485952 A0A1W2PQ64 194 aa6.2□□□□□ -1.42
SPTLC3-206ENST00000485952 A0A1W2PQC6 194 aa6.2□□□□□ -1.42
SPTLC3-206ENST00000485952 A0A1W2PQD8 194 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms