RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 FKBP1CQ5VVH2 108 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 KSR2Q6VAB6 950 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 Q6ZS46 218 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 TDRD7Q8NHU6 1098 aaKnown RBP8.38□□□□□ -1.07
SMC4-217ENST00000485867 FAM122AQ96E09 287 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 ZMYND15Q9H091 742 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 MUC3BQ9H195 1237 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 ZNF112Q9UJU3 913 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 OGDHLQ9ULD0 1010 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 FNDC3AQ9Y2H6 1198 aaKnown RBP8.38□□□□□ -1.07
SMC4-217ENST00000485867 MYH13Q9UKX3 1938 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 DOCK1Q14185 1865 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 ANKRD18BA2A2Z9 1011 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 PI4KAP2A4QPH2 592 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 ELL2O00472 640 aaPredicted RBP8.37□□□□□ -1.07
SMC4-217ENST00000485867 CXCL11O14625 94 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 HMGCRP04035 888 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 ATP11AP98196 1134 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 HDLBPQ00341 1268 aaKnown RBP8.37□□□□□ -1.07
SMC4-217ENST00000485867 NEXNQ0ZGT2 675 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 HYAL2Q12891 473 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 PRR23CQ6ZRP0 262 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 MIGA2Q7L4E1 593 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 PI4KAP1Q8N8J0 262 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 MYLIPQ8WY64 445 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 TMOD2Q9NZR1 351 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 PPME1Q9Y570 386 aa8.37□□□□□ -1.07
SMC4-217ENST00000485867 CACNA1FO60840 1977 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 A0A0G2JLL6 359 aaPredicted RBP8.36□□□□□ -1.07
SMC4-217ENST00000485867 KIF4AO95239 1232 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 ZNF853P0CG23 659 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 COL6A1P12109 1028 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 LRRC26Q2I0M4 334 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 PRRT2Q7Z6L0 340 aaPredicted RBP8.36□□□□□ -1.07
SMC4-217ENST00000485867 CCDC146Q8IYE0 955 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 TEKT1Q969V4 418 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 COA7Q96BR5 231 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 PSMG3-AS1Q96PY0 264 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 ABI2Q9NYB9 513 aaPredicted RBP8.36□□□□□ -1.07
SMC4-217ENST00000485867 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
SMC4-217ENST00000485867 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 TMEM265A0A087WTH1 108 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 TM4SF5O14894 197 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 HYAL3O43820 417 aaPredicted RBP8.35□□□□□ -1.07
SMC4-217ENST00000485867 GYG1P46976 350 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 GCKRQ14397 625 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
SMC4-217ENST00000485867 CCDC30Q5VVM6 783 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 APOBEC3HQ6NTF7 200 aaKnown RBP8.35□□□□□ -1.07
SMC4-217ENST00000485867 ADAMTSL4Q6UY14 1074 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 GADL1Q6ZQY3 521 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 FASTKD5Q7L8L6 764 aaKnown RBP8.35□□□□□ -1.07
SMC4-217ENST00000485867 GALNT11Q8NCW6 608 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 SMCR8Q8TEV9 937 aaPredicted RBP8.35□□□□□ -1.07
SMC4-217ENST00000485867 ZDHHC15Q96MV8 337 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 TTYH1Q9H313 450 aaPredicted RBP8.35□□□□□ -1.07
SMC4-217ENST00000485867 SLC45A1Q9Y2W3 748 aa8.35□□□□□ -1.07
SMC4-217ENST00000485867 BDP1A6H8Y1 2624 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 PLIN1O60240 522 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 CYP2E1P05181 493 aaPredicted RBP8.34□□□□□ -1.07
SMC4-217ENST00000485867 FOSL2P15408 326 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 HIBADHP31937 336 aaKnown RBP8.34□□□□□ -1.07
SMC4-217ENST00000485867 SCNN1AP37088 669 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 IFIT5Q13325 482 aaKnown RBP8.34□□□□□ -1.07
SMC4-217ENST00000485867 CEP135Q66GS9 1140 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
SMC4-217ENST00000485867 ANKRD13CQ8N6S4 541 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 C8orf58Q8NAV2 365 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 FAM151AQ8WW52 585 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.07
SMC4-217ENST00000485867 FAM84BQ96KN1 310 aaPredicted RBP8.34□□□□□ -1.07
SMC4-217ENST00000485867 SPACA7Q96KW9 195 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 LBHD1Q9BQE6 289 aaPredicted RBP8.34□□□□□ -1.07
SMC4-217ENST00000485867 RASSF4Q9H2L5 321 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 GJD2Q9UKL4 321 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 RNF112Q9ULX5 631 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 RLFQ13129 1914 aa8.34□□□□□ -1.07
SMC4-217ENST00000485867 LINC01387J3KSC0 135 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 SMNDC1O75940 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMC4-217ENST00000485867 FOXO4P98177 505 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 MAP3K12Q12852 859 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 CHAF1AQ13111 956 aaPredicted RBP8.33□□□□□ -1.08
SMC4-217ENST00000485867 UBE4AQ14139 1066 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 FAM110CQ1W6H9 321 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 MAP3K21Q5TCX8 1036 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 PDE12Q6L8Q7 609 aaKnown RBP8.33□□□□□ -1.08
SMC4-217ENST00000485867 AGGF1Q8N302 714 aaeCLIP8.33□□□□□ -1.08
SMC4-217ENST00000485867 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 TBC1D22AQ8WUA7 517 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 TRIB2Q92519 343 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 MRIQ9BWK5 157 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 LACRTQ9GZZ8 138 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 IFT57Q9NWB7 429 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 MUC6Q6W4X9 2439 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 ATAD5Q96QE3 1844 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 ATRNL1Q5VV63 1379 aa8.33□□□□□ -1.08
SMC4-217ENST00000485867 PTPRAP18433 802 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 TCP10Q12799 353 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 SHHQ15465 462 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 TXNDC11Q6PKC3 985 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms