RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 GPR142Q7Z601 462 aa20.19■□□□□ 0.82
SMARCD3-212ENST00000485610 ABRAQ8N0Z2 381 aa20.19■□□□□ 0.82
SMARCD3-212ENST00000485610 CHAMP1Q96JM3 812 aa20.19■□□□□ 0.82
SMARCD3-212ENST00000485610 POLR3EQ9NVU0 708 aa20.19■□□□□ 0.82
SMARCD3-212ENST00000485610 RNF186Q9NXI6 227 aa20.19■□□□□ 0.82
SMARCD3-212ENST00000485610 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 STRNO43815 780 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 ORC2Q13416 577 aaPredicted RBP20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 ANO1Q5XXA6 986 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 PLEKHH3Q7Z736 793 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 CRYGNQ8WXF5 182 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 TAAR1Q96RJ0 339 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 RMDN3Q96TC7 470 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 NAP1L4Q99733 375 aaKnown RBP20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 FTOQ9C0B1 505 aaKnown RBP eCLIP20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 CASP8AP2Q9UKL3 1982 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 GCFC2P16383 781 aaKnown RBP20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 NASPP49321 788 aaPredicted RBP20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 USP11P51784 963 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 NBR1Q14596 966 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 LETM2Q2VYF4 491 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 FAM133AQ8N9E0 248 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 DNERQ8NFT8 737 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 PXMP2Q9NR77 195 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 RTEL1Q9NZ71 1219 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 TFIP11Q9UBB9 837 aaKnown RBP20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 CNPY2Q9Y2B0 182 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 PCDHB6Q9Y5E3 794 aa20.18■□□□□ 0.82
SMARCD3-212ENST00000485610 DNAJC25-GNG10A0A024R161 153 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 WNT7AO00755 349 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 FIBPO43427 364 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 TRPA1O75762 1119 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 YEATS4O95619 227 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 TBC1D8O95759 1140 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 BMP15O95972 392 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 CYP3A4P08684 503 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 EIF2AK2P19525 551 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 PTPREP23469 700 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 GRB14Q14449 540 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 SF3A1Q15459 793 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 ARHGEF16Q5VV41 709 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 MOXD1Q6UVY6 613 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 NSUN6Q8TEA1 469 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 SCAND2PQ9GZW5 306 aaPredicted RBP20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 SAGE1Q9NXZ1 904 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 ADD3Q9UEY8 706 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 CEP131Q9UPN4 1083 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 CLIC4Q9Y696 253 aa20.17■□□□□ 0.82
SMARCD3-212ENST00000485610 SLC15A5A6NIM6 579 aa20.16■□□□□ 0.82
SMARCD3-212ENST00000485610 CCNT1O60563 726 aaKnown RBP20.16■□□□□ 0.82
SMARCD3-212ENST00000485610 ADORA2AP29274 412 aa20.16■□□□□ 0.82
SMARCD3-212ENST00000485610 CNTN2Q02246 1040 aa20.16■□□□□ 0.82
SMARCD3-212ENST00000485610 CEBPZQ03701 1054 aaKnown RBP20.16■□□□□ 0.82
SMARCD3-212ENST00000485610 PGM5Q15124 567 aa20.16■□□□□ 0.82
SMARCD3-212ENST00000485610 PURBQ96QR8 312 aaKnown RBP20.16■□□□□ 0.82
SMARCD3-212ENST00000485610 PDCD2LQ9BRP1 358 aa20.16■□□□□ 0.82
SMARCD3-212ENST00000485610 EDIL3O43854 480 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 PGK2P07205 417 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 CIITAP33076 1130 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 MCM7P33993 719 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 ALDH5A1P51649 535 aaPredicted RBP20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 UBXN2AP68543 259 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 STK38Q15208 465 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 ZNF174Q15697 407 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 PCNX4Q63HM2 1172 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 PPP4R3AQ6IN85 833 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 XRRA1Q6P2D8 792 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 IL31RAQ8NI17 732 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 SPATA32Q96LK8 384 aa20.15■□□□□ 0.82
SMARCD3-212ENST00000485610 TDP2O95551 362 aa20.14■□□□□ 0.81
SMARCD3-212ENST00000485610 MAP2K1Q02750 393 aaPredicted RBP20.14■□□□□ 0.81
SMARCD3-212ENST00000485610 CSPP1Q1MSJ5 1256 aa20.14■□□□□ 0.81
SMARCD3-212ENST00000485610 LINC00301Q8NCQ3 95 aa20.14■□□□□ 0.81
SMARCD3-212ENST00000485610 IWS1Q96ST2 819 aa20.14■□□□□ 0.81
SMARCD3-212ENST00000485610 ASTN1O14525 1302 aa20.14■□□□□ 0.81
SMARCD3-212ENST00000485610 CYP3A7-CYP3A51PA0A087WV96 503 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 LOC102724159A0A0B4J2E5 919 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 SOWAHBA6NEL2 793 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 TNPO2O14787 897 aaKnown RBP20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 NEMFO60524 1076 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 CYP3A7P24462 503 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 CCND2P30279 289 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 ZNF76P36508 570 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 FCGRTP55899 365 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 LACTBP83111 547 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 SLC39A14Q15043 492 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 PTPAQ15257 358 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 PWP2Q15269 919 aaKnown RBP20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 KCNG4Q8TDN1 519 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 LEO1Q8WVC0 666 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 MBOAT7Q96N66 472 aa20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 MPHOSPH6Q99547 160 aaKnown RBP20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 DDX25Q9UHL0 483 aaKnown RBP20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 MORC2Q9Y6X9 1032 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-212ENST00000485610 B4DLN1 442 aa20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 GOLGA6L22H0YM25 854 aa20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 NR3C2P08235 984 aa20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 ATP2C1P98194 919 aaPredicted RBP20.12■□□□□ 0.81
SMARCD3-212ENST00000485610 SP3Q02447 781 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms