RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 MSRAQ9UJ68 235 aa22.51■■□□□ 1.19
COL27A1-205ENST00000485397 SUPT20HL2P0C7V6 817 aa22.5■■□□□ 1.19
COL27A1-205ENST00000485397 NT5C2P49902 561 aa22.5■■□□□ 1.19
COL27A1-205ENST00000485397 RAB30Q15771 203 aa22.5■■□□□ 1.19
COL27A1-205ENST00000485397 IMMTQ16891 758 aaKnown RBP22.5■■□□□ 1.19
COL27A1-205ENST00000485397 BRDTQ58F21 947 aaPredicted RBP22.5■■□□□ 1.19
COL27A1-205ENST00000485397 FAM47CQ5HY64 1035 aa22.5■■□□□ 1.19
COL27A1-205ENST00000485397 RPUSD2Q8IZ73 545 aaKnown RBP22.5■■□□□ 1.19
COL27A1-205ENST00000485397 SYTL5Q8TDW5 730 aaPredicted RBP22.5■■□□□ 1.19
COL27A1-205ENST00000485397 TAAR1Q96RJ0 339 aa22.5■■□□□ 1.19
COL27A1-205ENST00000485397 IL25Q9H293 177 aa22.5■■□□□ 1.19
COL27A1-205ENST00000485397 VAT1LQ9HCJ6 419 aa22.5■■□□□ 1.19
COL27A1-205ENST00000485397 COL20A1Q9P218 1284 aa22.5■■□□□ 1.19
COL27A1-205ENST00000485397 YBX2Q9Y2T7 364 aaKnown RBP22.5■■□□□ 1.19
COL27A1-205ENST00000485397 A6NJR5 290 aa22.49■■□□□ 1.19
COL27A1-205ENST00000485397 B4DLN1 442 aa22.49■■□□□ 1.19
COL27A1-205ENST00000485397 MRPL12P52815 198 aaKnown RBP22.49■■□□□ 1.19
COL27A1-205ENST00000485397 TTLL4Q14679 1199 aa22.49■■□□□ 1.19
COL27A1-205ENST00000485397 QRICH1Q2TAL8 776 aa22.49■■□□□ 1.19
COL27A1-205ENST00000485397 ASPRV1Q53RT3 343 aa22.49■■□□□ 1.19
COL27A1-205ENST00000485397 GAS2L1Q99501 681 aaPredicted RBP22.49■■□□□ 1.19
COL27A1-205ENST00000485397 ABCB11O95342 1321 aa22.49■■□□□ 1.19
COL27A1-205ENST00000485397 RAD50Q92878 1312 aa22.49■■□□□ 1.19
COL27A1-205ENST00000485397 LAMA4Q16363 1823 aa22.48■■□□□ 1.19
COL27A1-205ENST00000485397 RABGGTBP53611 331 aa22.48■■□□□ 1.19
COL27A1-205ENST00000485397 PPM1EQ8WY54 764 aa22.48■■□□□ 1.19
COL27A1-205ENST00000485397 JMJD4Q9H9V9 463 aa22.48■■□□□ 1.19
COL27A1-205ENST00000485397 PRDM6Q9NQX0 595 aa22.48■■□□□ 1.19
COL27A1-205ENST00000485397 CTNNA3Q9UI47 895 aa22.48■■□□□ 1.19
COL27A1-205ENST00000485397 ZBBXA8MT70 800 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 DHX16O60231 1041 aaKnown RBP22.47■■□□□ 1.19
COL27A1-205ENST00000485397 KPNA6O60684 536 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 PARP1P09874 1014 aaKnown RBP22.47■■□□□ 1.19
COL27A1-205ENST00000485397 ADGRE1Q14246 886 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 CCDC62Q6P9F0 684 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 SEPT14Q6ZU15 432 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 DEFB128Q7Z7B8 93 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 KRT23Q9C075 422 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 SLC4A7Q9Y6M7 1214 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 MYO9BQ13459 2157 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 SCN10AQ9Y5Y9 1956 aa22.47■■□□□ 1.19
COL27A1-205ENST00000485397 EYSQ5T1H1 3165 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 MYOGP15173 224 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 LY6KQ17RY6 165 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 NFRKBQ6P4R8 1299 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 FBXO11Q86XK2 927 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 MCF2L2Q86YR7 1114 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 STAG2Q8N3U4 1231 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 NSUN6Q8TEA1 469 aaKnown RBP22.46■■□□□ 1.19
COL27A1-205ENST00000485397 AFG1LQ8WV93 481 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 SLC28A3Q9HAS3 691 aa22.46■■□□□ 1.19
COL27A1-205ENST00000485397 MRPL11Q9Y3B7 192 aaKnown RBP22.46■■□□□ 1.19
COL27A1-205ENST00000485397 CHMP4BP1P59074 171 aa22.45■■□□□ 1.18
COL27A1-205ENST00000485397 RMDN3Q96TC7 470 aa22.45■■□□□ 1.18
COL27A1-205ENST00000485397 UBAC1Q9BSL1 405 aa22.45■■□□□ 1.18
COL27A1-205ENST00000485397 MAF1Q9H063 256 aa22.45■■□□□ 1.18
COL27A1-205ENST00000485397 PDE4AP27815 886 aa22.44■■□□□ 1.18
COL27A1-205ENST00000485397 PTPN11Q06124 597 aaPredicted RBP22.44■■□□□ 1.18
COL27A1-205ENST00000485397 IFIT1BQ5T764 474 aaKnown RBP22.44■■□□□ 1.18
COL27A1-205ENST00000485397 CHST3Q7LGC8 479 aa22.44■■□□□ 1.18
COL27A1-205ENST00000485397 CNNM2Q9H8M5 875 aa22.44■■□□□ 1.18
COL27A1-205ENST00000485397 GH1P01241 217 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 PFKMP08237 780 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 MMP3P08254 477 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 IQCF3P0C7M6 154 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 GSPT1P15170 499 aaKnown RBP22.43■■□□□ 1.18
COL27A1-205ENST00000485397 ATP2A2P16615 1042 aaKnown RBP22.43■■□□□ 1.18
COL27A1-205ENST00000485397 EIF2AK2P19525 551 aaKnown RBP22.43■■□□□ 1.18
COL27A1-205ENST00000485397 IGFBP4P22692 258 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 ARHGAP1Q07960 439 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 SEC23AQ15436 765 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 STXBP2Q15833 593 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 ARHGEF16Q5VV41 709 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 CYB5R4Q7L1T6 521 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 RETREG2Q8NC44 543 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 IWS1Q96ST2 819 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 GBF1Q92538 1859 aa22.43■■□□□ 1.18
COL27A1-205ENST00000485397 SCN5AQ14524 2016 aa22.42■■□□□ 1.18
COL27A1-205ENST00000485397 CFBP00751 764 aa22.42■■□□□ 1.18
COL27A1-205ENST00000485397 NOD1Q9Y239 953 aa22.42■■□□□ 1.18
COL27A1-205ENST00000485397 PCDHA11Q9Y5I1 949 aa22.42■■□□□ 1.18
COL27A1-205ENST00000485397 KLRF2D3W0D1 207 aa22.41■■□□□ 1.18
COL27A1-205ENST00000485397 OPLAHO14841 1288 aa22.41■■□□□ 1.18
COL27A1-205ENST00000485397 PPP1R11O60927 126 aaPredicted RBP22.41■■□□□ 1.18
COL27A1-205ENST00000485397 CCDC85BQ15834 202 aaPredicted RBP22.41■■□□□ 1.18
COL27A1-205ENST00000485397 PPP2R2DQ66LE6 453 aa22.41■■□□□ 1.18
COL27A1-205ENST00000485397 KAT2BQ92831 832 aa22.41■■□□□ 1.18
COL27A1-205ENST00000485397 AMNQ9BXJ7 453 aa22.41■■□□□ 1.18
COL27A1-205ENST00000485397 PXMP2Q9NR77 195 aa22.41■■□□□ 1.18
COL27A1-205ENST00000485397 MAD2L2Q9UI95 211 aa22.41■■□□□ 1.18
COL27A1-205ENST00000485397 DDX41Q9UJV9 622 aaKnown RBP22.41■■□□□ 1.18
COL27A1-205ENST00000485397 PRUNE2Q8WUY3 3088 aa22.4■■□□□ 1.18
COL27A1-205ENST00000485397 PITPNM1O00562 1244 aa22.4■■□□□ 1.18
COL27A1-205ENST00000485397 NR3C2P08235 984 aa22.4■■□□□ 1.18
COL27A1-205ENST00000485397 RFC2P35250 354 aa22.4■■□□□ 1.18
COL27A1-205ENST00000485397 PTGISQ16647 500 aa22.4■■□□□ 1.18
COL27A1-205ENST00000485397 TJAP1Q5JTD0 557 aa22.4■■□□□ 1.18
COL27A1-205ENST00000485397 TTC22Q5TAA0 569 aa22.4■■□□□ 1.18
COL27A1-205ENST00000485397 SYMPKQ92797 1274 aaKnown RBP22.4■■□□□ 1.18
COL27A1-205ENST00000485397 MTMR8Q96EF0 704 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms