RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 SNHG28P0DPA3 235 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 PDHBP11177 359 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 MX1P20591 662 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 RPS6P62753 249 aaKnown RBP16.16■□□□□ 0.18
NUP188-206ENST00000485158 BFSP2Q13515 415 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 VPS53Q5VIR6 699 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 RNF207Q6ZRF8 634 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 RGS22Q8NE09 1264 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 MPHOSPH6Q99547 160 aaKnown RBP16.16■□□□□ 0.18
NUP188-206ENST00000485158 TET1Q8NFU7 2136 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 ZMYM6O95789 1325 aa16.16■□□□□ 0.18
NUP188-206ENST00000485158 TLL1O43897 1013 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 LPXNO60711 386 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 RBL2Q08999 1139 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 RETREG2Q8NC44 543 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 TTC14Q96N46 770 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 CTAGE1Q96RT6 745 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 HELLSQ9NRZ9 838 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 LMCD1Q9NZU5 365 aa16.15■□□□□ 0.18
NUP188-206ENST00000485158 B4DLN1 442 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 KIF28PB7ZC32 967 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 TXNP10599 105 aaKnown RBP16.14■□□□□ 0.17
NUP188-206ENST00000485158 CALML3P27482 149 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 MRPL12P52815 198 aaKnown RBP16.14■□□□□ 0.17
NUP188-206ENST00000485158 PDE4DQ08499 809 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 ZNF543Q08ER8 600 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 GPNMBQ14956 572 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 CCDC62Q6P9F0 684 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 BRWD1Q9NSI6 2320 aa16.14■□□□□ 0.17
NUP188-206ENST00000485158 ARIH2O95376 493 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 PARNO95453 639 aaKnown RBP16.13■□□□□ 0.17
NUP188-206ENST00000485158 FGAP02671 866 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 PCP11498 1178 aaKnown RBP16.13■□□□□ 0.17
NUP188-206ENST00000485158 GRB10Q13322 594 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 SKIV2LQ15477 1246 aaKnown RBP16.13■□□□□ 0.17
NUP188-206ENST00000485158 FAM47CQ5HY64 1035 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 AFAP1L1Q8TED9 768 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 ARNTL2Q8WYA1 636 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 COPS5Q92905 334 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 HLA-CQ95604 372 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 EVI5LQ96CN4 794 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 FAM122AQ96E09 287 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 CERS4Q9HA82 394 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 GPCPD1Q9NPB8 672 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 MTMR7Q9Y216 660 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
NUP188-206ENST00000485158 FRMPD2Q68DX3 1309 aaPredicted RBP16.13■□□□□ 0.17
NUP188-206ENST00000485158 CXCL10P02778 98 aa16.12■□□□□ 0.17
NUP188-206ENST00000485158 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
NUP188-206ENST00000485158 DIEXFQ68CQ4 756 aaKnown RBP16.12■□□□□ 0.17
NUP188-206ENST00000485158 KRT40Q6A162 431 aa16.12■□□□□ 0.17
NUP188-206ENST00000485158 CCDC155Q8N6L0 562 aa16.12■□□□□ 0.17
NUP188-206ENST00000485158 FTOQ9C0B1 505 aaKnown RBP eCLIP16.12■□□□□ 0.17
NUP188-206ENST00000485158 PTPRSQ13332 1948 aa16.11■□□□□ 0.17
NUP188-206ENST00000485158 PIEZO1Q92508 2521 aa16.11■□□□□ 0.17
NUP188-206ENST00000485158 WDR5P61964 334 aaKnown RBP16.11■□□□□ 0.17
NUP188-206ENST00000485158 PTGISQ16647 500 aa16.11■□□□□ 0.17
NUP188-206ENST00000485158 GPATCH4Q5T3I0 446 aaKnown RBP16.11■□□□□ 0.17
NUP188-206ENST00000485158 KAT2BQ92831 832 aa16.11■□□□□ 0.17
NUP188-206ENST00000485158 TRIP12Q14669 1992 aaPredicted RBP16.1■□□□□ 0.17
NUP188-206ENST00000485158 MMP3P08254 477 aa16.1■□□□□ 0.17
NUP188-206ENST00000485158 HSPD1P10809 573 aaKnown RBP16.1■□□□□ 0.17
NUP188-206ENST00000485158 SELPP16109 830 aa16.1■□□□□ 0.17
NUP188-206ENST00000485158 NT5C2P49902 561 aa16.1■□□□□ 0.17
NUP188-206ENST00000485158 GDF6Q6KF10 455 aaPredicted RBP16.1■□□□□ 0.17
NUP188-206ENST00000485158 PPP1R13LQ8WUF5 828 aa16.1■□□□□ 0.17
NUP188-206ENST00000485158 DHX38Q92620 1227 aaKnown RBP16.1■□□□□ 0.17
NUP188-206ENST00000485158 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
NUP188-206ENST00000485158 LRFN3Q9BTN0 628 aa16.1■□□□□ 0.17
NUP188-206ENST00000485158 EPHX3Q9H6B9 360 aa16.1■□□□□ 0.17
NUP188-206ENST00000485158 NOD1Q9Y239 953 aa16.1■□□□□ 0.17
NUP188-206ENST00000485158 LCHNA4D1U4 455 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 GH1P01241 217 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 KCNJ6P48051 423 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 ARHGAP1Q07960 439 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 MCMDC2Q4G0Z9 681 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 CNKSR3Q6P9H4 555 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 LRRC8DQ7L1W4 858 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 SPRED2Q7Z698 418 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 AFG1LQ8WV93 481 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 TOMM22Q9NS69 142 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 GTF2IRD1Q9UHL9 959 aa16.09■□□□□ 0.17
NUP188-206ENST00000485158 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 ABHD14A-ACY1A0A1B0GW23 586 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 GPR37L1O60883 481 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 NBNO60934 754 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 EFCAB14O75071 495 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 GJB5O95377 273 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
NUP188-206ENST00000485158 ERVK-21P61565 698 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 RRP12Q5JTH9 1297 aaKnown RBP16.08■□□□□ 0.16
NUP188-206ENST00000485158 NSUN6Q8TEA1 469 aaKnown RBP16.08■□□□□ 0.16
NUP188-206ENST00000485158 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 RAD9AQ99638 391 aa16.08■□□□□ 0.16
NUP188-206ENST00000485158 C11orf16Q9NQ32 467 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms