RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 ERVK-21P61565 698 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 HDAC1Q13547 482 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-202ENST00000485065 SNRNP48Q6IEG0 339 aaKnown RBP11.7□□□□□ -0.54
TRUB1-202ENST00000485065 CTR9Q6PD62 1173 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 DEFB128Q7Z7B8 93 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 TLK2Q86UE8 772 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 CCDC144CPQ8IYA2 1237 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 ADAM33Q9BZ11 813 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 SUGCTQ9HAC7 445 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 ATP8A2Q9NTI2 1148 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 FBXO40Q9UH90 709 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 RIPK3Q9Y572 518 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 SPTBN4Q9H254 2564 aa11.7□□□□□ -0.54
TRUB1-202ENST00000485065 TET1Q8NFU7 2136 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 COL4A4P53420 1690 aaPredicted RBP11.69□□□□□ -0.54
TRUB1-202ENST00000485065 GSG1L2A8MUP6 293 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 USP17L12C9JPN9 530 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 USP17L21D6R901 530 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 IQCF3P0C7M6 154 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 ZP2Q05996 745 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 NOL8Q76FK4 1167 aaKnown RBP11.69□□□□□ -0.54
TRUB1-202ENST00000485065 PRPF38AQ8NAV1 312 aaKnown RBP11.69□□□□□ -0.54
TRUB1-202ENST00000485065 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 GDPD5Q8WTR4 605 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 SEC62Q99442 399 aaKnown RBP11.69□□□□□ -0.54
TRUB1-202ENST00000485065 SLF1Q9BQI6 1058 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRUB1-202ENST00000485065 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRUB1-202ENST00000485065 KANSL2Q9H9L4 492 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 TECTAO75443 2155 aa11.69□□□□□ -0.54
TRUB1-202ENST00000485065 TTC41PQ6P2S7 1318 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.68□□□□□ -0.54
TRUB1-202ENST00000485065 ASB14A6NK59 587 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 M0R2C6 588 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 RNF113AO15541 343 aaKnown RBP11.68□□□□□ -0.54
TRUB1-202ENST00000485065 IGHDP01880 384 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 EEF2P13639 858 aaKnown RBP11.68□□□□□ -0.54
TRUB1-202ENST00000485065 AKR1B1P15121 316 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 HERC4Q5GLZ8 1057 aaPredicted RBP11.68□□□□□ -0.54
TRUB1-202ENST00000485065 IQSEC1Q6DN90 963 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 CLEC10AQ8IUN9 316 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 ADHFE1Q8IWW8 467 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 PRSS33Q8NF86 280 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 TGS1Q96RS0 853 aaKnown RBP11.68□□□□□ -0.54
TRUB1-202ENST00000485065 IRX2Q9BZI1 471 aaPredicted RBP11.68□□□□□ -0.54
TRUB1-202ENST00000485065 IRF2BPLQ9H1B7 796 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 CTNNA3Q9UI47 895 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 SLC4A4Q9Y6R1 1079 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 MYH8P13535 1937 aa11.68□□□□□ -0.54
TRUB1-202ENST00000485065 FOXP2O15409 715 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 DYNC1LI2O43237 492 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-202ENST00000485065 CYP2C9P11712 490 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 KCNJ6P48051 423 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 CDK8P49336 464 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 OAZ1P54368 228 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 PSMC6P62333 389 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 COL19A1Q14993 1142 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
TRUB1-202ENST00000485065 FAM83BQ5T0W9 1011 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 C16orf86Q6ZW13 317 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 SPRED2Q7Z698 418 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 FAM133AQ8N9E0 248 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 RETREG2Q8NC44 543 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 EXOC6Q8TAG9 804 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 RAD9AQ99638 391 aa11.67□□□□□ -0.54
TRUB1-202ENST00000485065 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRUB1-202ENST00000485065 EPB41L4AQ9HCS5 686 aaPredicted RBP11.67□□□□□ -0.54
TRUB1-202ENST00000485065 TRMT13Q9NUP7 481 aaKnown RBP11.67□□□□□ -0.54
TRUB1-202ENST00000485065 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
TRUB1-202ENST00000485065 TRIOO75962 3097 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 LCHNA4D1U4 455 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 GFRA3O60609 400 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 ZBED4O75132 1171 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 SMPD1P17405 629 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 MX1P20591 662 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 BFSP2Q13515 415 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 SBK1Q52WX2 424 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 ANKRD45Q5TZF3 282 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 ZSCAN25Q6NSZ9 544 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 ERMP1Q7Z2K6 904 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 SMC5Q8IY18 1101 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 APPBP2Q92624 585 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 MRPL38Q96DV4 380 aaKnown RBP11.66□□□□□ -0.54
TRUB1-202ENST00000485065 SLC38A10Q9HBR0 1119 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
TRUB1-202ENST00000485065 ZFHX2Q9C0A1 2572 aaPredicted RBP11.66□□□□□ -0.54
TRUB1-202ENST00000485065 RIF1Q5UIP0 2472 aaKnown RBP11.65□□□□□ -0.54
TRUB1-202ENST00000485065 PTPRSQ13332 1948 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 GPAA1O43292 621 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 GJB5O95377 273 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 PARNO95453 639 aaKnown RBP11.65□□□□□ -0.54
TRUB1-202ENST00000485065 FDX1P10109 184 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 IRS1P35568 1242 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 WDR5P61964 334 aaKnown RBP11.65□□□□□ -0.54
TRUB1-202ENST00000485065 PTPN11Q06124 597 aaPredicted RBP11.65□□□□□ -0.54
TRUB1-202ENST00000485065 TCF15Q12870 199 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 ZMYM1Q5SVZ6 1142 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 NFRKBQ6P4R8 1299 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms