RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 CPT1AP50416 773 aa18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ALDH5A1P51649 535 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 CHMP4BP1P59074 171 aa18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 CCDC96Q2M329 555 aa18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 RRP12Q5JTH9 1297 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 GDPD5Q8WTR4 605 aa18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 FAM227BQ96M60 508 aa18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ANAPC4Q9UJX5 808 aa18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 COL4A4P53420 1690 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-208ENST00000484729 TET1Q8NFU7 2136 aa18.05■□□□□ 0.48
HLA-DQB1-208ENST00000484729 BRWD1Q9NSI6 2320 aa18.05■□□□□ 0.48
HLA-DQB1-208ENST00000484729 PI4K2BG5E9Z4 385 aa18.05■□□□□ 0.48
HLA-DQB1-208ENST00000484729 PITPNM1O00562 1244 aa18.05■□□□□ 0.48
HLA-DQB1-208ENST00000484729 PLA2G6O60733 806 aa18.05■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ALYREFQ86V81 257 aaKnown RBP18.05■□□□□ 0.48
HLA-DQB1-208ENST00000484729 COPS5Q92905 334 aa18.05■□□□□ 0.48
HLA-DQB1-208ENST00000484729 LNPKQ9C0E8 428 aa18.05■□□□□ 0.48
HLA-DQB1-208ENST00000484729 RBM47A0AV96 593 aaKnown RBP18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 TRIM6-TRIM34B2RNG4 842 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 NFIBO00712 420 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ORC4O43929 436 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ICAM1P05362 532 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 SLC16A2P36021 539 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ALX1Q15699 326 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 MCMDC2Q4G0Z9 681 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ADD3Q9UEY8 706 aaKnown RBP18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 MTUS1Q9ULD2 1270 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 PTPRSQ13332 1948 aa18.04■□□□□ 0.48
HLA-DQB1-208ENST00000484729 TANC1Q9C0D5 1861 aa18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 SCN10AQ9Y5Y9 1956 aa18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 PTPDC1A2A3K4 754 aa18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 KCNJ6P48051 423 aa18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 NMIQ13287 307 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 NFRKBQ6P4R8 1299 aa18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 DCAF4Q8WV16 495 aa18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 NOD1Q9Y239 953 aa18.03■□□□□ 0.48
HLA-DQB1-208ENST00000484729 BAIAP3O94812 1187 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 FGAP02671 866 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 CALML3P27482 149 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 HAND2P61296 217 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 WDR5P61964 334 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 DEFB103AP81534 67 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 BFSP2Q13515 415 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 GPNMBQ14956 572 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ZNF589Q86UQ0 364 aaPredicted RBP18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 RILPL2Q969X0 211 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 ZBED2Q9BTP6 218 aa18.02■□□□□ 0.48
HLA-DQB1-208ENST00000484729 CCDC171Q6TFL3 1326 aa18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 A6NJR5 290 aa18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 HSPD1P10809 573 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 NOVP48745 357 aa18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PPP2R5BQ15173 497 aa18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 BRDTQ58F21 947 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 B4GALNT3Q6L9W6 998 aa18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 RANBP17Q9H2T7 1088 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 SUGCTQ9HAC7 445 aa18.01■□□□□ 0.47
HLA-DQB1-208ENST00000484729 FRMPD2Q68DX3 1309 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 FGRP09769 529 aa18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TOP1P11387 765 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PTPN11Q06124 597 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PDE4DQ08499 809 aa18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PTGISQ16647 500 aa18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TCTN1Q2MV58 587 aa18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 SYDE2Q5VT97 1194 aa18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 CTAGE1Q96RT6 745 aa18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TMEM47Q9BQJ4 181 aa18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 UBE2ZQ9H832 354 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 LMCD1Q9NZU5 365 aa18■□□□□ 0.47
HLA-DQB1-208ENST00000484729 ZMYM6O95789 1325 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 RAD50Q92878 1312 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TRIP12Q14669 1992 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 KPNA6O60684 536 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TXNP10599 105 aaKnown RBP17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 GDF6Q6KF10 455 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 FAM178BQ8IXR5 827 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 GJD3Q8N144 294 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 CLEC4DQ8WXI8 215 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 UIMC1Q96RL1 719 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 RWDD1Q9H446 243 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 GPCPD1Q9NPB8 672 aa17.99■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PRR33A8MZF0 331 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 NKRFO15226 690 aaKnown RBP eCLIP17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 ARIH2O95376 493 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 KCNA5P22460 613 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 SSTR3P32745 418 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 AAMPQ13685 434 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 FAM117BQ6P1L5 589 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 RNF207Q6ZRF8 634 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 MFSD6Q6ZSS7 791 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 SMC5Q8IY18 1101 aa17.98■□□□□ 0.47
HLA-DQB1-208ENST00000484729 SCFD2Q8WU76 684 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms