RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, human

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA4-206	ENST00000484388	IRF2BPL	Q9H1B7	796 aa		3.08	□□□□□ -1.92
ABCA4-206	ENST00000484388	ERVK13-1	Q9NX77	482 aa		3.08	□□□□□ -1.92
ABCA4-206	ENST00000484388	TNFRSF10D	Q9UBN6	386 aa		3.08	□□□□□ -1.92
ABCA4-206	ENST00000484388	PCDHA8	Q9Y5H6	950 aa		3.08	□□□□□ -1.92
ABCA4-206	ENST00000484388	TIMM13	Q9Y5L4	95 aa	Predicted RBP	3.08	□□□□□ -1.92
ABCA4-206	ENST00000484388		A0A1W2PQ45	241 aa	Predicted RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388		A0A1W2PQY0	241 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	C7orf72	A4D263	438 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	FAM47E-STBD1	D6RA91	191 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388		H7BY64	318 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	CBX4	O00257	560 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	MYO1B	O43795	1136 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	ZEB2	O60315	1214 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	NPHS1	O60500	1241 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	KPNA6	O60684	536 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	FKTN	O75072	461 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	F2	P00734	622 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	PRNP	P04156	253 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	SOD2	P04179	222 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	BPI	P17213	487 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	RPL10	P27635	214 aa	Known RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	HOXA10	P31260	410 aa	Predicted RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	GRIK1	P39086	918 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	KIR2DL1	P43626	348 aa	Predicted RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	KIR2DL2	P43627	348 aa	Predicted RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	RPL11	P62913	178 aa	Known RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	DUSP4	Q13115	394 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	LSAMP	Q13449	338 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	SEPT7	Q16181	437 aa	Known RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	PIK3R6	Q5UE93	754 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	ZPBP2	Q6X784	338 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	C16orf59	Q7L2K0	433 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	WAPL	Q7Z5K2	1190 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	NECAB2	Q7Z6G3	386 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	FERMT3	Q86UX7	667 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	CPNE8	Q86YQ8	564 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	ZC3H7A	Q8IWR0	971 aa	Known RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388		Q8N1Y9	231 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	NAT16	Q8N8M0	369 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	OR2W6P	Q8NHA6	318 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	ATL2	Q8NHH9	583 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	LINC01599	Q8WXQ3	324 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	FBXW5	Q969U6	566 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	MAP6	Q96JE9	813 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	G6PC3	Q9BUM1	346 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	CDIP1	Q9H305	208 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	BSDC1	Q9NW68	430 aa	Predicted RBP	3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	SAMD15	Q9P1V8	674 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	ADGRE2	Q9UHX3	823 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	PCDHA2	Q9Y5H9	948 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	PHLDB1	Q86UU1	1377 aa		3.07	□□□□□ -1.92
ABCA4-206	ENST00000484388	CCDC66	A2RUB6	948 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	FADS2P1	A8MWK0	482 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388		M0R2C6	588 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	TRAF5	O00463	557 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	GPR39	O43194	453 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	GLRX3	O76003	335 aa	Known RBP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	TGFB1	P01137	390 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	GRK2	P25098	689 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	GRK3	P35626	688 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	BCL6	P41182	706 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	SCNN1B	P51168	640 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	MECP2	P51608	486 aa	Known RBP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	CORO7	P57737	925 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	LACTB	P83111	547 aa	Predicted RBP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	STRN3	Q13033	797 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	LAPTM5	Q13571	262 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	ARHGAP44	Q17R89	818 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	TMEM177	Q53S58	311 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	BRDT	Q58F21	947 aa	Predicted RBP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	FAM47C	Q5HY64	1035 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	RNF219	Q5W0B1	726 aa	Predicted RBP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	SLCO6A1	Q86UG4	719 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	IGSF22	Q8N9C0	903 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	BCL7C	Q8WUZ0	217 aa	Predicted RBP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	DPF3	Q92784	378 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	SYTL4	Q96C24	671 aa	Predicted RBP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	ASIC4	Q96FT7	647 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	CCDC120	Q96HB5	630 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	ALPK1	Q96QP1	1244 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	CEP89	Q96ST8	783 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	TTC1	Q99614	292 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	IFT22	Q9H7X7	185 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	B4GALT6	Q9UBX8	382 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388		X6R8D5	127 aa		3.06	□□□□□ -1.92
ABCA4-206	ENST00000484388	WASHC2C	Q9Y4E1	1318 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	COBL	O75128	1261 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	S100B	P04271	92 aa	Predicted RBP	3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	ZGLP1	P0C6A0	271 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	SRGAP2C	P0DJJ0	459 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	EVA1C	P58658	441 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	DSG1	Q02413	1049 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	CHRNE	Q04844	493 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	BNIP3	Q12983	259 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	IKZF1	Q13422	519 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	STAT4	Q14765	748 aa		3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	HABP4	Q5JVS0	413 aa	Known RBP	3.05	□□□□□ -1.92
ABCA4-206	ENST00000484388	PRSS36	Q5K4E3	855 aa		3.05	□□□□□ -1.92

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