RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ZDBF2Q9HCK1 2354 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 SCN9AQ15858 1988 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 USP34Q70CQ2 3546 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 PNMA6FA0A0J9YX94 578 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 USP17L5A8MUK1 530 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 ZNF202O95125 648 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 CETPP11597 493 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 ID4P47928 161 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 FOSBP53539 338 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 NR5A1Q13285 461 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 IRF5Q13568 498 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 ACAP1Q15027 740 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 ABCB5Q2M3G0 1257 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 SLC35G1Q2M3R5 365 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 MCTP2Q6DN12 878 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 PPP1R18Q6NYC8 613 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 USP17L2Q6R6M4 530 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 SHC4Q6S5L8 630 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 SASS6Q6UVJ0 657 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 SIAH1Q8IUQ4 282 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 ZSCAN29Q8IWY8 852 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-206ENST00000483876 FSIP1Q8NA03 581 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 OXER1Q8TDS5 423 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 TIFAQ96CG3 184 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 CCDC34Q96HJ3 373 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 GMCL1Q96IK5 515 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 PDLIM2Q96JY6 352 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 CNTNAP3BQ96NU0 1288 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 SDF4Q9BRK5 362 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 CNTNAP3Q9BZ76 1288 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 FTOQ9C0B1 505 aaKnown RBP eCLIP6.17□□□□□ -1.42
COL17A1-206ENST00000483876 GOLPH3LQ9H4A5 285 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 DNAJC18Q9H819 358 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 FAM13BQ9NYF5 915 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 SEC63Q9UGP8 760 aaKnown RBP6.17□□□□□ -1.42
COL17A1-206ENST00000483876 USP25Q9UHP3 1055 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 HOOK1Q9UJC3 728 aaKnown RBP6.17□□□□□ -1.42
COL17A1-206ENST00000483876 FBXO2Q9UK22 296 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-206ENST00000483876 OGDHLQ9ULD0 1010 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 PSME4Q14997 1843 aa6.17□□□□□ -1.42
COL17A1-206ENST00000483876 KMT2BQ9UMN6 2715 aaPredicted RBP6.17□□□□□ -1.42
COL17A1-206ENST00000483876 A0A1B0GVL5 298 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 STXBP3O00186 592 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 PLA2G6O60733 806 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 COL6A1P12109 1028 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 EEF2P13639 858 aaKnown RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 MARCKSP29966 332 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 PRPHP41219 470 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 SYKP43405 635 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 TNNI2P48788 182 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 NDUFA8P51970 172 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 MRPL12P52815 198 aaKnown RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 ATP2C1P98194 919 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 TYRO3Q06418 890 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 TCP10Q12799 353 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 SEMA3FQ13275 785 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 TNFAIP1Q13829 316 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 ADGRE1Q14246 886 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 SKIV2LQ15477 1246 aaKnown RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 CAMK4Q16566 473 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 CT47A1Q5JQC4 288 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 TTC38Q5R3I4 469 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 NBPF12Q5TAG4 269 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 WWC2Q6AWC2 1192 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 BTNL9Q6UXG8 535 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 KRT25Q7Z3Z0 450 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 C4orf32Q8N8J7 132 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 FAM200AQ8TCP9 573 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 RNPC3Q96LT9 517 aaKnown RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 NAT10Q9H0A0 1025 aaKnown RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 HMX1Q9NP08 348 aaPredicted RBP6.16□□□□□ -1.42
COL17A1-206ENST00000483876 ANO10Q9NW15 660 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 KIAA1468Q9P260 1216 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 KCNH3Q9ULD8 1083 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 PCDHA6Q9UN73 950 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 PCDHB6Q9Y5E3 794 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 PCDHA8Q9Y5H6 950 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 PPP2R3BQ9Y5P8 575 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 MYH15Q9Y2K3 1946 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 CFAP54Q96N23 3096 aa6.16□□□□□ -1.42
COL17A1-206ENST00000483876 ECM29Q5VYK3 1845 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 TCF20Q9UGU0 1960 aaKnown RBP6.15□□□□□ -1.42
COL17A1-206ENST00000483876 XIRP2A4UGR9 3374 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-206ENST00000483876 CCDC194A0A1B0GVG4 234 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-206ENST00000483876 hCG_1642624A0A1W2PR95 340 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 SMCO2A6NFE2 343 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 F5H6K3 240 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 MPHOSPH10O00566 681 aaKnown RBP6.15□□□□□ -1.42
COL17A1-206ENST00000483876 ZBTB5O15062 677 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 TLL1O43897 1013 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 GOLGA8HP0CJ92 632 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 ALADP13716 330 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 PFKFB1P16118 471 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 LONP1P36776 959 aaKnown RBP6.15□□□□□ -1.42
COL17A1-206ENST00000483876 SLC1A4P43007 532 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 CACNB3P54284 484 aa6.15□□□□□ -1.42
COL17A1-206ENST00000483876 KLRC3Q07444 240 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms