RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 MYH7BA7E2Y1 1941 aa16.34■□□□□ 0.21
VARS-226ENST00000483275 ZMYM6O95789 1325 aa16.34■□□□□ 0.21
VARS-226ENST00000483275 RFXAPO00287 272 aa16.33■□□□□ 0.2
VARS-226ENST00000483275 ARHGEF15O94989 841 aa16.33■□□□□ 0.2
VARS-226ENST00000483275 EDNRBP24530 442 aa16.33■□□□□ 0.2
VARS-226ENST00000483275 HDAC1Q13547 482 aaPredicted RBP16.33■□□□□ 0.2
VARS-226ENST00000483275 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
VARS-226ENST00000483275 GPHNQ9NQX3 736 aaPredicted RBP16.33■□□□□ 0.2
VARS-226ENST00000483275 EPOPA6NHQ4 379 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 CA3P07451 260 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 SNHG28P0DPA3 235 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 TXNP10599 105 aaKnown RBP16.32■□□□□ 0.2
VARS-226ENST00000483275 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
VARS-226ENST00000483275 KRT40Q6A162 431 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 SPRED2Q7Z698 418 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 ADAMTS19Q8TE59 1207 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 SCFD2Q8WU76 684 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 NECAB3Q96P71 396 aaPredicted RBP16.32■□□□□ 0.2
VARS-226ENST00000483275 COL20A1Q9P218 1284 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 RAPGEFL1Q9UHV5 662 aa16.32■□□□□ 0.2
VARS-226ENST00000483275 TNFRSF10AO00220 468 aa16.31■□□□□ 0.2
VARS-226ENST00000483275 KDM4AO75164 1064 aa16.31■□□□□ 0.2
VARS-226ENST00000483275 TFF2Q03403 129 aa16.31■□□□□ 0.2
VARS-226ENST00000483275 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
VARS-226ENST00000483275 RPUSD2Q8IZ73 545 aaKnown RBP16.31■□□□□ 0.2
VARS-226ENST00000483275 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
VARS-226ENST00000483275 ASB2Q96Q27 587 aa16.31■□□□□ 0.2
VARS-226ENST00000483275 PCDHA11Q9Y5I1 949 aa16.31■□□□□ 0.2
VARS-226ENST00000483275 RAD50Q92878 1312 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 B4E1Z4 1266 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 SUPT20HL2P0C7V6 817 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 SDSP20132 328 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 LY6KQ17RY6 165 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 TMCO2Q7Z6W1 182 aaPredicted RBP16.3■□□□□ 0.2
VARS-226ENST00000483275 PNMA1Q8ND90 353 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 ESR2Q92731 530 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 TAAR1Q96RJ0 339 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 SEZ6LQ9BYH1 1024 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 FTOQ9C0B1 505 aaKnown RBP eCLIP16.3■□□□□ 0.2
VARS-226ENST00000483275 BRWD1Q9NSI6 2320 aa16.3■□□□□ 0.2
VARS-226ENST00000483275 BAZ2BQ9UIF8 2168 aaKnown RBP16.29■□□□□ 0.2
VARS-226ENST00000483275 A6NJR5 290 aa16.29■□□□□ 0.2
VARS-226ENST00000483275 SORBS3O60504 671 aa16.29■□□□□ 0.2
VARS-226ENST00000483275 CWC27Q6UX04 472 aaKnown RBP16.29■□□□□ 0.2
VARS-226ENST00000483275 ADGRF4Q8IZF3 695 aa16.29■□□□□ 0.2
VARS-226ENST00000483275 DNERQ8NFT8 737 aa16.29■□□□□ 0.2
VARS-226ENST00000483275 ATXN2LQ8WWM7 1075 aaKnown RBP16.29■□□□□ 0.2
VARS-226ENST00000483275 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
VARS-226ENST00000483275 DOCK5Q9H7D0 1870 aa16.29■□□□□ 0.2
VARS-226ENST00000483275 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 NKRFO15226 690 aaKnown RBP eCLIP16.28■□□□□ 0.2
VARS-226ENST00000483275 DHX16O60231 1041 aaKnown RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 MMP3P08254 477 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 IQCF3P0C7M6 154 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 ARHGAP1Q07960 439 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 SKIV2LQ15477 1246 aaKnown RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 BRDTQ58F21 947 aaPredicted RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 TMEM67Q5HYA8 995 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 GPATCH4Q5T3I0 446 aaKnown RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 GDF6Q6KF10 455 aaPredicted RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 NFRKBQ6P4R8 1299 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 ENAHQ8N8S7 591 aaPredicted RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 SYTL5Q8TDW5 730 aaPredicted RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 TTC14Q96N46 770 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 CTAGE1Q96RT6 745 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 UHRF1Q96T88 793 aaPredicted RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 RNF41Q9H4P4 317 aaPredicted RBP16.28■□□□□ 0.2
VARS-226ENST00000483275 KAT14Q9H8E8 782 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 VAT1LQ9HCJ6 419 aa16.28■□□□□ 0.2
VARS-226ENST00000483275 ZNF213O14771 459 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 IGHDP01880 384 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 PFKMP08237 780 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 ZNF286BP0CG31 522 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 KCNQ1P51787 676 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 TCTN1Q2MV58 587 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 RETREG2Q8NC44 543 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 ARNTL2Q8WYA1 636 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 DHX38Q92620 1227 aaKnown RBP16.27■□□□□ 0.2
VARS-226ENST00000483275 MPHOSPH6Q99547 160 aaKnown RBP16.27■□□□□ 0.2
VARS-226ENST00000483275 IL25Q9H293 177 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
VARS-226ENST00000483275 ABCB11O95342 1321 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 LCHNA4D1U4 455 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 ACTN1P12814 892 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 PTGISQ16647 500 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 DGKHQ86XP1 1220 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 HERC6Q8IVU3 1022 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 KAT2BQ92831 832 aa16.26■□□□□ 0.19
VARS-226ENST00000483275 ZSCAN10Q96SZ4 725 aaPredicted RBP16.26■□□□□ 0.19
VARS-226ENST00000483275 RMDN3Q96TC7 470 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms