RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 BADQ92934 168 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 TRIM43Q96BQ3 446 aaPredicted RBP27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 TOX2Q96NM4 488 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 NEK1Q96PY6 1258 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 SLC12A7Q9Y666 1083 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 RANBP2P49792 3224 aaKnown RBP27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 LTBP2Q14767 1821 aa27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 NKRFO15226 690 aaKnown RBP eCLIP27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 CALM1P0DP23 149 aa27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 CALM2P0DP24 149 aa27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 CALM3P0DP25 149 aa27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 LIFRP42702 1097 aa27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 CPT1AP50416 773 aa27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 HSD17B4P51659 736 aa27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 COL9A3Q14050 684 aaPredicted RBP27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 TTLL4Q14679 1199 aa27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 RRP36Q96EU6 259 aaKnown RBP27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 SEC63Q9UGP8 760 aaKnown RBP27.25■■□□□ 1.95
RHBDF1-208ENST00000482904 ARVCFO00192 962 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 OPLAHO14841 1288 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 TXNP10599 105 aaKnown RBP27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 RAG1P15918 1043 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 RXRAP19793 462 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 HOXA13P31271 388 aaPredicted RBP27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 GNAQP50148 359 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 STXBP2Q15833 593 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 BRDTQ58F21 947 aaPredicted RBP27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 IWS1Q96ST2 819 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 LZTS2Q9BRK4 669 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 PXMP2Q9NR77 195 aa27.24■■□□□ 1.95
RHBDF1-208ENST00000482904 TLR3O15455 904 aaKnown RBP27.23■■□□□ 1.95
RHBDF1-208ENST00000482904 KRT32Q14532 448 aa27.23■■□□□ 1.95
RHBDF1-208ENST00000482904 SEPT14Q6ZU15 432 aa27.23■■□□□ 1.95
RHBDF1-208ENST00000482904 MICU3Q86XE3 530 aa27.23■■□□□ 1.95
RHBDF1-208ENST00000482904 RAB11FIP4Q86YS3 637 aa27.23■■□□□ 1.95
RHBDF1-208ENST00000482904 SPZ1Q9BXG8 430 aa27.23■■□□□ 1.95
RHBDF1-208ENST00000482904 GCOM1H8Y6P7 765 aaPredicted RBP27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 SOX1O00570 391 aaPredicted RBP27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 KIAA0355O15063 1070 aa27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 POLR2MP0CAP2 368 aa27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 GHRHRQ02643 423 aa27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 FAAP100Q0VG06 881 aa27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 SYNE3Q6ZMZ3 975 aa27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 POLR3EQ9NVU0 708 aa27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 MAP3K20Q9NYL2 800 aaKnown RBP27.22■■□□□ 1.95
RHBDF1-208ENST00000482904 PLEKHA8P1O95397 391 aa27.21■■□□□ 1.95
RHBDF1-208ENST00000482904 MYL3P08590 195 aa27.21■■□□□ 1.95
RHBDF1-208ENST00000482904 SAMD3Q8N6K7 520 aa27.21■■□□□ 1.95
RHBDF1-208ENST00000482904 NR3C2P08235 984 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 CDK7P50613 346 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 PSMC6P62333 389 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 ITGA7Q13683 1181 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 FAM126BQ8IXS8 530 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 RASEFQ8IZ41 740 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 COPS5Q92905 334 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 LRCH3Q96II8 777 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 TCEANC2Q96MN5 208 aa27.2■■□□□ 1.94
RHBDF1-208ENST00000482904 ARIH2O95376 493 aa27.19■■□□□ 1.94
RHBDF1-208ENST00000482904 MYCLP12524 364 aaPredicted RBP27.19■■□□□ 1.94
RHBDF1-208ENST00000482904 ITGB8P26012 769 aa27.19■■□□□ 1.94
RHBDF1-208ENST00000482904 LRIT3Q3SXY7 679 aa27.19■■□□□ 1.94
RHBDF1-208ENST00000482904 FCHSD1Q86WN1 690 aa27.19■■□□□ 1.94
RHBDF1-208ENST00000482904 PDCD2LQ9BRP1 358 aa27.19■■□□□ 1.94
RHBDF1-208ENST00000482904 DNAH12Q6ZR08 3092 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 EIF3JO75822 258 aaKnown RBP27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 REC8O95072 547 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 CENPBP07199 599 aaPredicted RBP27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 SMARCA1P28370 1054 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 FGD1P98174 961 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 ADCK5Q3MIX3 580 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 DHX32Q7L7V1 743 aaKnown RBP27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 SGMS1Q86VZ5 419 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 CMTR1Q8N1G2 835 aaKnown RBP27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 SEZ6LQ9BYH1 1024 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 TBX21Q9UL17 535 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 MRVI1Q9Y6F6 885 aa27.18■■□□□ 1.94
RHBDF1-208ENST00000482904 GH1P01241 217 aa27.17■■□□□ 1.94
RHBDF1-208ENST00000482904 HMGB1P09429 215 aaKnown RBP27.17■■□□□ 1.94
RHBDF1-208ENST00000482904 PURAQ00577 322 aaKnown RBP27.17■■□□□ 1.94
RHBDF1-208ENST00000482904 FPGSQ05932 587 aa27.17■■□□□ 1.94
RHBDF1-208ENST00000482904 LY6KQ17RY6 165 aa27.17■■□□□ 1.94
RHBDF1-208ENST00000482904 TSGA10IPQ3SY00 556 aa27.17■■□□□ 1.94
RHBDF1-208ENST00000482904 SRBD1Q8N5C6 995 aaKnown RBP27.17■■□□□ 1.94
RHBDF1-208ENST00000482904 CUL5Q93034 780 aa27.17■■□□□ 1.94
RHBDF1-208ENST00000482904 CCND2P30279 289 aa27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 PGM5Q15124 567 aa27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 APOA5Q6Q788 366 aa27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 TMTC3Q6ZXV5 915 aa27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 CCDC82Q8N4S0 544 aa27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 FANCBQ8NB91 859 aa27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 MTG1Q9BT17 334 aaPredicted RBP27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 PPP1R12CQ9BZL4 782 aa27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 PPP4R2Q9NY27 417 aa27.16■■□□□ 1.94
RHBDF1-208ENST00000482904 A6NJR5 290 aa27.15■■□□□ 1.94
RHBDF1-208ENST00000482904 TIMP1P01033 207 aa27.15■■□□□ 1.94
RHBDF1-208ENST00000482904 CCDC62Q6P9F0 684 aa27.15■■□□□ 1.94
RHBDF1-208ENST00000482904 SLC43A3Q8NBI5 491 aa27.15■■□□□ 1.94
RHBDF1-208ENST00000482904 SMARCC2Q8TAQ2 1214 aa27.15■■□□□ 1.94
RHBDF1-208ENST00000482904 NAP1L2Q9ULW6 460 aaPredicted RBP27.15■■□□□ 1.94
RHBDF1-208ENST00000482904 ZBTB43O43298 467 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms