RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 VTA1Q9NP79 307 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 BAZ2BQ9UIF8 2168 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PTGS1P23219 599 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 FXR1P51114 621 aaKnown RBP eCLIP11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 GJA9P57773 515 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PDE4DQ08499 809 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 GNASQ5JWF2 1037 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 TLK2Q86UE8 772 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 IGDCC4Q8TDY8 1250 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MPHOSPH6Q99547 160 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MYL10Q9BUA6 226 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 AMNQ9BXJ7 453 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 UPF3AQ9H1J1 476 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 LY9Q9HBG7 655 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 GPHNQ9NQX3 736 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 STARD7Q9NQZ5 370 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MRPL11Q9Y3B7 192 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 LTBP2Q14767 1821 aa11.62□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 ASGR1P07306 291 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 SMPD1P17405 629 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CST5P28325 142 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 BEX3Q00994 111 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 TROAPQ12815 778 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 COL9A3Q14050 684 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 RNF20Q5VTR2 975 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 TAPT1Q6NXT6 567 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 NFXL1Q6ZNB6 911 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PCSK9Q8NBP7 692 aaKnown RBP11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 DNERQ8NFT8 737 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MORC4Q8TE76 937 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 TBC1D5Q92609 795 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 VTI1AQ96AJ9 217 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 AP5M1Q9H0R1 490 aa11.61□□□□□ -0.55
HLA-DQA1-206ENST00000482745 LOC102724159A0A0B4J2E5 919 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 ZBTB5O15062 677 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PQBP1O60828 265 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 TLE2Q04725 743 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PWP2Q15269 919 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 TMEM63BQ5T3F8 832 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CCSAPQ6IQ19 270 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MCF2L2Q86YR7 1114 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 ZNF654Q8IZM8 581 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 GLT1D1Q96MS3 346 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PIGSQ96S52 555 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 LBHD1Q9BQE6 289 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 LRRC2Q9BYS8 371 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 UBE2OQ9C0C9 1292 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 GNEQ9Y223 722 aaKnown RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CCDC69A6NI79 296 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 DYNC1LI2O43237 492 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PPP1R11O60927 126 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CFBP00751 764 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 SLC35G1Q2M3R5 365 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 C1orf53Q5VUE5 145 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 IQSEC1Q6DN90 963 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 RGS22Q8NE09 1264 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CTCFLQ8NI51 663 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 SYTL5Q8TDW5 730 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PIBF1Q8WXW3 757 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MTMR8Q96EF0 704 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 TMEM87BQ96K49 555 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PDLIM7Q9NR12 457 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 PCDHA1Q9Y5I3 950 aa11.6□□□□□ -0.55
HLA-DQA1-206ENST00000482745 A0A0U1RQG5 324 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 A0A1W2PPC1 479 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 B4DLN1 442 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 SH2B2O14492 632 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CTAGE5O15320 804 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 DDAH1O94760 285 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 BMP8BP34820 402 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MRPL12P52815 198 aaKnown RBP11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 FSCN1Q16658 493 aaKnown RBP11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CAVIN1Q6NZI2 390 aaKnown RBP11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 TAAR1Q96RJ0 339 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 MTA3Q9BTC8 594 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 WDR11Q9BZH6 1224 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 RBSNQ9H1K0 784 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 RIOX1Q9H6W3 641 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 COL20A1Q9P218 1284 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 LAMA3Q16787 3333 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CYTH3O43739 400 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 CD2BP2O95400 341 aaKnown RBP11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 RXRAP19793 462 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 EDNRBP24530 442 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 KIF5BP33176 963 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 FGD1P98174 961 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 DUSP28Q4G0W2 176 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 SH3RF1Q7Z6J0 888 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 RAB11FIP4Q86YS3 637 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 GTPBP4Q9BZE4 634 aaKnown RBP11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 SZT2Q5T011 3432 aa11.59□□□□□ -0.55
HLA-DQA1-206ENST00000482745 ELP1O95163 1332 aa11.58□□□□□ -0.56
HLA-DQA1-206ENST00000482745 OPLAHO14841 1288 aa11.58□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CLTBP09497 229 aa11.58□□□□□ -0.56
HLA-DQA1-206ENST00000482745 PPP2R5BQ15173 497 aa11.58□□□□□ -0.56
HLA-DQA1-206ENST00000482745 CXCL17Q6UXB2 119 aa11.58□□□□□ -0.56
HLA-DQA1-206ENST00000482745 NSUN6Q8TEA1 469 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms