RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 BRIP1Q9BX63 1249 aa15.86■□□□□ 0.13
COL9A2-207ENST00000482722 NHEJ1Q9H9Q4 299 aaPredicted RBP15.86■□□□□ 0.13
COL9A2-207ENST00000482722 SNX12Q9UMY4 172 aa15.86■□□□□ 0.13
COL9A2-207ENST00000482722 NKRFO15226 690 aaKnown RBP eCLIP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 SERPINB2P05120 415 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 LSP1P33241 339 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 CYLC1P35663 651 aaPredicted RBP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 RNF187Q5TA31 235 aaPredicted RBP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 SPATA4Q8NEY3 305 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 TRIM47Q96LD4 638 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 MCM9Q9NXL9 1143 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 EHD2Q9NZN4 543 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 BCORQ6W2J9 1755 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 CHUKO15111 745 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 SCP2P22307 547 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 MEA1Q16626 185 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 KRT27Q7Z3Y8 459 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 TNFRSF25Q93038 417 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 PURBQ96QR8 312 aaKnown RBP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 DCP1AQ9NPI6 582 aaPredicted RBP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 LAMB2P55268 1798 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 BMP15O95972 392 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 PLEKP08567 350 aaPredicted RBP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 USP17L8P0C7I0 530 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 RDXP35241 583 aaKnown RBP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 STAT6P42226 847 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 APBA1Q02410 837 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 PPARDQ03181 441 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 EMBQ6PCB8 327 aa15.85■□□□□ 0.13
COL9A2-207ENST00000482722 SPATS2Q86XZ4 545 aaKnown RBP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 CRNKL1Q9BZJ0 848 aaKnown RBP15.85■□□□□ 0.13
COL9A2-207ENST00000482722 RREB1Q92766 1687 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 A6NNZ2 444 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 RIMBP2O15034 1052 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 DDAH1O94760 285 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 IPO7O95373 1038 aaKnown RBP15.84■□□□□ 0.13
COL9A2-207ENST00000482722 TUBB8Q3ZCM7 444 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 ZNF473Q8WTR7 871 aaKnown RBP15.84■□□□□ 0.13
COL9A2-207ENST00000482722 EPN3Q9H201 632 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 KLC4Q9NSK0 619 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 MCM8Q9UJA3 840 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 A0A1W2PQC6 194 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 C21orf2O43822 256 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 ERCC3P19447 782 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 IBSPP21815 317 aaPredicted RBP15.84■□□□□ 0.13
COL9A2-207ENST00000482722 GPSM2P81274 684 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 ATP2B2Q01814 1243 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 NEDD9Q14511 834 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 HAUS3Q68CZ6 603 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 RPGRQ92834 1020 aaKnown RBP15.84■□□□□ 0.13
COL9A2-207ENST00000482722 STIM2Q9P246 746 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
COL9A2-207ENST00000482722 LRWD1Q9UFC0 647 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 CAPN6Q9Y6Q1 641 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 MYH10P35580 1976 aa15.84■□□□□ 0.13
COL9A2-207ENST00000482722 H7C1D1 291 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 ELF1P32519 619 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 SEC24CP53992 1094 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 KIF5AQ12840 1032 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 MICALCLQ6ZW33 695 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 STAG2Q8N3U4 1231 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 DYNLL2Q96FJ2 89 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 CENPHQ9H3R5 247 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 VCPKMTQ9H867 229 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 DUOX1Q9NRD9 1551 aa15.83■□□□□ 0.13
COL9A2-207ENST00000482722 FAM205AQ6ZU69 1335 aa15.83■□□□□ 0.12
COL9A2-207ENST00000482722 ACTN3Q08043 901 aaPredicted RBP15.83■□□□□ 0.12
COL9A2-207ENST00000482722 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
COL9A2-207ENST00000482722 CCDC96Q2M329 555 aa15.83■□□□□ 0.12
COL9A2-207ENST00000482722 NFRKBQ6P4R8 1299 aa15.83■□□□□ 0.12
COL9A2-207ENST00000482722 KDM7AQ6ZMT4 941 aa15.83■□□□□ 0.12
COL9A2-207ENST00000482722 CAVIN3Q969G5 261 aa15.83■□□□□ 0.12
COL9A2-207ENST00000482722 MLXIPQ9HAP2 919 aa15.83■□□□□ 0.12
COL9A2-207ENST00000482722 PDS5AQ29RF7 1337 aaKnown RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 ZNF263O14978 683 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 HDLBPQ00341 1268 aaKnown RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 TFAP4Q01664 338 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 CCDC40Q4G0X9 1142 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 PREPLQ4J6C6 727 aaPredicted RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 ZNF572Q7Z3I7 529 aaPredicted RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 YTHDF3Q7Z739 585 aaKnown RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 CCDC13Q8IYE1 715 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 ADSSL1Q8N142 457 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 PAGR1Q9BTK6 254 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 ZNHIT6Q9NWK9 470 aaKnown RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 MAGEC2Q9UBF1 373 aaPredicted RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 ZNF233A6NK53 670 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 RASSF10A6NK89 507 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 F8W031 263 aaPredicted RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 ONECUT3O60422 494 aaPredicted RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 UFL1O94874 794 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 VAV2P52735 878 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 SMTNP53814 917 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 TBC1D8BQ0IIM8 1120 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 IFT88Q13099 833 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 TXNRD1Q16881 649 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 DZIP1Q86YF9 867 aaKnown RBP15.82■□□□□ 0.12
COL9A2-207ENST00000482722 SLC44A5Q8NCS7 719 aa15.82■□□□□ 0.12
COL9A2-207ENST00000482722 RUBCNQ92622 972 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms