RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 KIF5BP33176 963 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 GHRHRQ02643 423 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 PPP2R5BQ15173 497 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 ZNF654Q8IZM8 581 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 OR6J1Q8NGC5 347 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 CTCFLQ8NI51 663 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 LRCH3Q96II8 777 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 POLR3EQ9NVU0 708 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 COL20A1Q9P218 1284 aa17.81■□□□□ 0.44
EXOSC3-205ENST00000482614 CCDC69A6NI79 296 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 SH2B2O14492 632 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 CYTH3O43739 400 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 PPP1R11O60927 126 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 LIFRP42702 1097 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 CPT1AP50416 773 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 HSD17B4P51659 736 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 TTLL4Q14679 1199 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 STXBP2Q15833 593 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 SLC35G1Q2M3R5 365 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 BRDTQ58F21 947 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 ARHGEF16Q5VV41 709 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 GPR153Q6NV75 609 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 SLC43A3Q8NBI5 491 aa17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 BAZ2BQ9UIF8 2168 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-205ENST00000482614 OPLAHO14841 1288 aa17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 NEFLP07196 543 aa17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 TXNP10599 105 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 ITGB8P26012 769 aa17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 SMARCA1P28370 1054 aa17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 GNAQP50148 359 aa17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 ITGA7Q13683 1181 aa17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 LZTS2Q9BRK4 669 aa17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 PXMP2Q9NR77 195 aa17.79■□□□□ 0.44
EXOSC3-205ENST00000482614 KIAA1217Q5T5P2 1943 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 TIMP1P01033 207 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 CALM1P0DP23 149 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 CALM2P0DP24 149 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 CALM3P0DP25 149 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 FAM126BQ8IXS8 530 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 MYL10Q9BUA6 226 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 SPZ1Q9BXG8 430 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 TBX21Q9UL17 535 aa17.78■□□□□ 0.44
EXOSC3-205ENST00000482614 GCOM1H8Y6P7 765 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 KPNA6O60684 536 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 CD4P01730 458 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 NR3C2P08235 984 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 MYL3P08590 195 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 POLR2MP0CAP2 368 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 FPGSQ05932 587 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 SHHQ15465 462 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 CCDC62Q6P9F0 684 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 SEPT14Q6ZU15 432 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 RRP36Q96EU6 259 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 NEK1Q96PY6 1258 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 SLC12A7Q9Y666 1083 aa17.77■□□□□ 0.44
EXOSC3-205ENST00000482614 GRIN2DO15399 1336 aa17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 A6NJR5 290 aa17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 ARIH2O95376 493 aa17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 PURAQ00577 322 aaKnown RBP17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 COL9A3Q14050 684 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 TSGA10IPQ3SY00 556 aa17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 PIBF1Q8WXW3 757 aa17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 COPS5Q92905 334 aa17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 PDCD2LQ9BRP1 358 aa17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 MTG1Q9BT17 334 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-205ENST00000482614 GH1P01241 217 aa17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 HOXA13P31271 388 aaPredicted RBP17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 PSMC6P62333 389 aa17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 KRT32Q14532 448 aa17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 C9orf50Q5SZB4 431 aa17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 MFSD5Q6N075 450 aa17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 SYNE3Q6ZMZ3 975 aa17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 SGMS1Q86VZ5 419 aa17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 LRRC2Q9BYS8 371 aa17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 SEC63Q9UGP8 760 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-205ENST00000482614 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
EXOSC3-205ENST00000482614 LY6KQ17RY6 165 aa17.74■□□□□ 0.43
EXOSC3-205ENST00000482614 DHX32Q7L7V1 743 aaKnown RBP17.74■□□□□ 0.43
EXOSC3-205ENST00000482614 TMEM199Q8N511 208 aa17.74■□□□□ 0.43
EXOSC3-205ENST00000482614 SRBD1Q8N5C6 995 aaKnown RBP17.74■□□□□ 0.43
EXOSC3-205ENST00000482614 DDX41Q9UJV9 622 aaKnown RBP17.74■□□□□ 0.43
EXOSC3-205ENST00000482614 PLEKHA8P1O95397 391 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 RXRAP19793 462 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 CCND2P30279 289 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 EXOSC10Q01780 885 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 ARHGAP1Q07960 439 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 PPIGQ13427 754 aaKnown RBP eCLIP17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 PGM5Q15124 567 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 KCNV1Q6PIU1 500 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 VSIG10LQ86VR7 867 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 FCHSD1Q86WN1 690 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 RASEFQ8IZ41 740 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 FANCBQ8NB91 859 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 PPP1R12CQ9BZL4 782 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 MRVI1Q9Y6F6 885 aa17.73■□□□□ 0.43
EXOSC3-205ENST00000482614 SZT2Q5T011 3432 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms