RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TNK2Q07912 1038 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 GORABQ5T7V8 394 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 EGFLAMQ63HQ2 1017 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 CCDC120Q96HB5 630 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 SYT17Q9BSW7 474 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 KCNK12Q9HB15 430 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 SLAMF8Q9P0V8 285 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 FLT4P35916 1363 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 RRS1Q15050 365 aaKnown RBP8.57□□□□□ -1.04
CLK1-212ENST00000482590 SIAH1Q8IUQ4 282 aa8.57□□□□□ -1.04
CLK1-212ENST00000482590 ZCRB1Q8TBF4 217 aaKnown RBP8.57□□□□□ -1.04
CLK1-212ENST00000482590 RAPGEF4Q8WZA2 1011 aa8.57□□□□□ -1.04
CLK1-212ENST00000482590 GPATCH3Q96I76 525 aa8.57□□□□□ -1.04
CLK1-212ENST00000482590 TANGO6Q9C0B7 1094 aa8.57□□□□□ -1.04
CLK1-212ENST00000482590 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
CLK1-212ENST00000482590 NSD2O96028 1365 aa8.57□□□□□ -1.04
CLK1-212ENST00000482590 KIF24Q5T7B8 1368 aa8.57□□□□□ -1.04
CLK1-212ENST00000482590 CGNL1Q0VF96 1302 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 PCDH11XQ9BZA7 1347 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 PCDH11YQ9BZA8 1340 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 DNAJC25-GNG10A0A024R161 153 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 GFRA2O00451 464 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 NFIBO00712 420 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 ZSCAN22P10073 491 aaPredicted RBP8.56□□□□□ -1.04
CLK1-212ENST00000482590 KIR3DL1P43629 444 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 HDLBPQ00341 1268 aaKnown RBP8.56□□□□□ -1.04
CLK1-212ENST00000482590 RALGPS1Q5JS13 557 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 TTC6Q86TZ1 520 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 CDH24Q86UP0 819 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 USHBP1Q8N6Y0 703 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 COX4I2Q96KJ9 171 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 DNAJC2Q99543 621 aaKnown RBP8.56□□□□□ -1.04
CLK1-212ENST00000482590 TFCP2L1Q9NZI6 479 aa8.56□□□□□ -1.04
CLK1-212ENST00000482590 PNPLA7Q6ZV29 1317 aa8.55□□□□□ -1.04
CLK1-212ENST00000482590 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
CLK1-212ENST00000482590 SCAMP3O14828 347 aaKnown RBP8.55□□□□□ -1.04
CLK1-212ENST00000482590 ESR1P03372 595 aa8.55□□□□□ -1.04
CLK1-212ENST00000482590 CYP7A1P22680 504 aa8.55□□□□□ -1.04
CLK1-212ENST00000482590 FBLN1P23142 703 aa8.55□□□□□ -1.04
CLK1-212ENST00000482590 SDE2Q6IQ49 451 aa8.55□□□□□ -1.04
CLK1-212ENST00000482590 ABHD4Q8TB40 342 aa8.55□□□□□ -1.04
CLK1-212ENST00000482590 CCNL1Q9UK58 526 aaPredicted RBP8.55□□□□□ -1.04
CLK1-212ENST00000482590 PCDHB5Q9Y5E4 795 aa8.55□□□□□ -1.04
CLK1-212ENST00000482590 INSRP06213 1382 aa8.55□□□□□ -1.04
CLK1-212ENST00000482590 WASH4PA8MWX3 477 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 FYB1O15117 783 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 P4HBP07237 508 aaKnown RBP8.54□□□□□ -1.04
CLK1-212ENST00000482590 ERVFC1P60507 584 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 IGBP1P78318 339 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 RAD51AP2Q09MP3 1159 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 SEPT6Q14141 434 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 NBPF6Q5VWK0 638 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 NBPF4Q96M43 638 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 DPH2Q9BQC3 489 aaPredicted RBP8.54□□□□□ -1.04
CLK1-212ENST00000482590 BACH2Q9BYV9 841 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 TJP2Q9UDY2 1190 aa8.54□□□□□ -1.04
CLK1-212ENST00000482590 COL5A3P25940 1745 aaPredicted RBP8.54□□□□□ -1.04
CLK1-212ENST00000482590 PALLDQ8WX93 1383 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 RAC2P15153 192 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 HMGB2P26583 209 aaKnown RBP8.53□□□□□ -1.04
CLK1-212ENST00000482590 RPS26P62854 115 aaKnown RBP8.53□□□□□ -1.04
CLK1-212ENST00000482590 GPR162Q16538 588 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 PTPROQ16827 1216 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 CCDC144BQ3MJ40 725 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 TMPRSS7Q7RTY8 843 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
CLK1-212ENST00000482590 SLC43A3Q8NBI5 491 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 ARMC5Q96C12 935 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 EPB41L4BQ9H329 900 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 DCP1AQ9NPI6 582 aaPredicted RBP8.53□□□□□ -1.04
CLK1-212ENST00000482590 TACC3Q9Y6A5 838 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 ZNF831Q5JPB2 1677 aa8.53□□□□□ -1.04
CLK1-212ENST00000482590 C4AP0C0L4 1744 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 NPIPB6E9PJ23 425 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 TMEM253P0C7T8 217 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 IRX6P78412 446 aaPredicted RBP8.52□□□□□ -1.05
CLK1-212ENST00000482590 HSP90AB2PQ58FF8 381 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 PIWIL2Q8TC59 973 aaKnown RBP8.52□□□□□ -1.05
CLK1-212ENST00000482590 KRTAP4-11Q9BYQ6 195 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 CD320Q9NPF0 282 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 TMEM59LQ9UK28 342 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 NCAPD2Q15021 1401 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 KIF13BQ9NQT8 1826 aa8.52□□□□□ -1.05
CLK1-212ENST00000482590 hCG_2014768A0A024R1R8 64 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 LDHBP07195 334 aaKnown RBP8.51□□□□□ -1.05
CLK1-212ENST00000482590 HK2P52789 917 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 MRPL58Q14197 206 aaKnown RBP8.51□□□□□ -1.05
CLK1-212ENST00000482590 CCDC85BQ15834 202 aaPredicted RBP8.51□□□□□ -1.05
CLK1-212ENST00000482590 LILRA6Q6PI73 481 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 MYLIPQ8WY64 445 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 Q96M66 194 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 FRMD6Q96NE9 622 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 TINF2Q9BSI4 451 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 ADAMTS10Q9H324 1103 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 KLHL42Q9P2K6 505 aa8.51□□□□□ -1.05
CLK1-212ENST00000482590 MAGEC2Q9UBF1 373 aaPredicted RBP8.51□□□□□ -1.05
CLK1-212ENST00000482590 N4BP2Q86UW6 1770 aaPredicted RBP8.5□□□□□ -1.05
CLK1-212ENST00000482590 SCN11AQ9UI33 1791 aa8.5□□□□□ -1.05
CLK1-212ENST00000482590 HPXP02790 462 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms