RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 TAAR1Q96RJ0 339 aa11.33□□□□□ -0.6
TMEM39A-207ENST00000482162 MPHOSPH6Q99547 160 aaKnown RBP11.33□□□□□ -0.6
TMEM39A-207ENST00000482162 AMNQ9BXJ7 453 aa11.33□□□□□ -0.6
TMEM39A-207ENST00000482162 RBM8AQ9Y5S9 174 aaKnown RBP11.33□□□□□ -0.6
TMEM39A-207ENST00000482162 IFIT3O14879 490 aaKnown RBP11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 ZBTB5O15062 677 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 KPNA6O60684 536 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 ARIH2O95376 493 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 SMARCA1P28370 1054 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 NECTIN1Q15223 517 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 BMP2KLQ5H9B9 411 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 ESYT1Q9BSJ8 1104 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 NOC4LQ9BVI4 516 aaKnown RBP11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 VAT1LQ9HCJ6 419 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 COL6A3P12111 3177 aa11.32□□□□□ -0.6
TMEM39A-207ENST00000482162 SCN10AQ9Y5Y9 1956 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 TLR3O15455 904 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 B4GALT4O60513 344 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 EIF3JO75822 258 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 CPT1AP50416 773 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 PSMC6P62333 389 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 TRAF1Q13077 416 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 COL9A3Q14050 684 aaPredicted RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 PPP2R5BQ15173 497 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 MTG1Q9BT17 334 aaPredicted RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 TRPV6Q9H1D0 765 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 ALDH8A1Q9H2A2 487 aaPredicted RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 DDX41Q9UJV9 622 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 BAZ2BQ9UIF8 2168 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-207ENST00000482162 TMEM265A0A087WTH1 108 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 DLL1O00548 723 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 RGS20O76081 388 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 NR3C2P08235 984 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 CSF2RAP15509 400 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 CYP2C18P33260 490 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 PTPN11Q06124 597 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.61e-6■□□□□ 8.5
TMEM39A-207ENST00000482162 TTLL4Q14679 1199 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 WTAPQ15007 396 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 SART3Q15020 963 aaKnown RBP11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 STXBP2Q15833 593 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 TMEM67Q5HYA8 995 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 NFRKBQ6P4R8 1299 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 CENPQQ7L2Z9 268 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 CHST3Q7LGC8 479 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 TMEM199Q8N511 208 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 OR6J1Q8NGC5 347 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 COPS5Q92905 334 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 RNPC3Q96LT9 517 aaKnown RBP11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.3□□□□□ -0.67e-8■■■■□ 20.4
TMEM39A-207ENST00000482162 SEMA6BQ9H3T3 888 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 PCDHA1Q9Y5I3 950 aa11.3□□□□□ -0.6
TMEM39A-207ENST00000482162 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 ERICH2A1L162 156 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 SLC27A2O14975 620 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 HOXD8P13378 290 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 LIFRP42702 1097 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 TSGA10IPQ3SY00 556 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 CATIPQ7Z7H3 387 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 SESTD1Q86VW0 696 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 TMTC2Q8N394 836 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 HERVK_113Q902F9 699 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 PIGSQ96S52 555 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 PDCD2LQ9BRP1 358 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 WNT8AQ9H1J5 351 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 TTYH1Q9H313 450 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 HIPK3Q9H422 1215 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 IL23AQ9NPF7 189 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 UMODL1Q5DID0 1318 aa11.29□□□□□ -0.6
TMEM39A-207ENST00000482162 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 DDAH1O94760 285 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 CFBP00751 764 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 GH1P01241 217 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 SUPT20HL2P0C7V6 817 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 MCM5P33992 734 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 LY6KQ17RY6 165 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 NBPF20Q3BBV1 942 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 BRDTQ58F21 947 aaPredicted RBP11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 ARHGEF16Q5VV41 709 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 CREB3L3Q68CJ9 461 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 SEPT14Q6ZU15 432 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms