RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 KRT25Q7Z3Z0 450 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 MSL3Q8N5Y2 521 aaKnown RBP23.71■■□□□ 1.39
VPS16-207ENST00000481812 NSUN6Q8TEA1 469 aaKnown RBP23.71■■□□□ 1.39
VPS16-207ENST00000481812 TNFRSF25Q93038 417 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 TAAR1Q96RJ0 339 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 IWS1Q96ST2 819 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 RMDN3Q96TC7 470 aa23.71■■□□□ 1.39
VPS16-207ENST00000481812 RPTORQ8N122 1335 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 SOWAHBA6NEL2 793 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 BTBD18B2RXH4 712 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 B4DLN1 442 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 FCHSD1Q86WN1 690 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 OXER1Q8TDS5 423 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 FGD4Q96M96 766 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 APBA2Q99767 749 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 PXMP2Q9NR77 195 aa23.7■■□□□ 1.38
VPS16-207ENST00000481812 MYH7BA7E2Y1 1941 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 DDIT3P35638 169 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 FLT3LGP49771 235 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 ALDH5A1P51649 535 aaPredicted RBP23.69■■□□□ 1.38
VPS16-207ENST00000481812 JAKMIP3Q5VZ66 844 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 MAMDC4Q6UXC1 1216 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 TRMT44Q8IYL2 757 aaKnown RBP23.69■■□□□ 1.38
VPS16-207ENST00000481812 MORC4Q8TE76 937 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 MPHOSPH6Q99547 160 aaKnown RBP23.69■■□□□ 1.38
VPS16-207ENST00000481812 ANO3Q9BYT9 981 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 TMEM260Q9NX78 707 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 GABRQQ9UN88 632 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 MTMR6Q9Y217 621 aa23.69■■□□□ 1.38
VPS16-207ENST00000481812 ASB14A6NK59 587 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 ECM2O94769 699 aaPredicted RBP23.68■■□□□ 1.38
VPS16-207ENST00000481812 SREBF1P36956 1147 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 PRKCZQ05513 592 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 NR5A1Q13285 461 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 ARHGEF16Q5VV41 709 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 OLFML2BQ68BL8 750 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 XRRA1Q6P2D8 792 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 OTOP1Q7RTM1 612 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 NPLOC4Q8TAT6 608 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 RASGRP4Q8TDF6 673 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 MAML3Q96JK9 1138 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 PDCD2LQ9BRP1 358 aa23.68■■□□□ 1.38
VPS16-207ENST00000481812 ASTN1O14525 1302 aa23.67■■□□□ 1.38
VPS16-207ENST00000481812 CCDC194A0A1B0GVG4 234 aa23.67■■□□□ 1.38
VPS16-207ENST00000481812 VPS37CA5D8V6 355 aaPredicted RBP23.67■■□□□ 1.38
VPS16-207ENST00000481812 IGHA2P01877 340 aa23.67■■□□□ 1.38
VPS16-207ENST00000481812 EDNRBP24530 442 aa23.67■■□□□ 1.38
VPS16-207ENST00000481812 LBX1P52954 281 aa23.67■■□□□ 1.38
VPS16-207ENST00000481812 NONOQ15233 471 aaKnown RBP eCLIP23.67■■□□□ 1.38
VPS16-207ENST00000481812 CRYGNQ8WXF5 182 aa23.67■■□□□ 1.38
VPS16-207ENST00000481812 PURBQ96QR8 312 aaKnown RBP23.67■■□□□ 1.38
VPS16-207ENST00000481812 MCM3APO60318 1980 aa23.66■■□□□ 1.38
VPS16-207ENST00000481812 CYP3A4P08684 503 aa23.66■■□□□ 1.38
VPS16-207ENST00000481812 CYP2B6P20813 491 aa23.66■■□□□ 1.38
VPS16-207ENST00000481812 GNL2Q13823 731 aaKnown RBP23.66■■□□□ 1.38
VPS16-207ENST00000481812 PGM5Q15124 567 aa23.66■■□□□ 1.38
VPS16-207ENST00000481812 NOSTRINQ8IVI9 506 aa23.66■■□□□ 1.38
VPS16-207ENST00000481812 TRIM17Q9Y577 477 aa23.66■■□□□ 1.38
VPS16-207ENST00000481812 SYNGAP1Q96PV0 1343 aa23.65■■□□□ 1.38
VPS16-207ENST00000481812 NR3C2P08235 984 aa23.65■■□□□ 1.38
VPS16-207ENST00000481812 USP11P51784 963 aa23.65■■□□□ 1.38
VPS16-207ENST00000481812 PCNX4Q63HM2 1172 aa23.65■■□□□ 1.38
VPS16-207ENST00000481812 MCTP1Q6DN14 999 aa23.65■■□□□ 1.38
VPS16-207ENST00000481812 BRAPQ7Z569 592 aa23.65■■□□□ 1.38
VPS16-207ENST00000481812 VSIG10LQ86VR7 867 aa23.65■■□□□ 1.38
VPS16-207ENST00000481812 PXYLP1Q8TE99 480 aa23.65■■□□□ 1.38
VPS16-207ENST00000481812 ZSCAN16Q9H4T2 348 aaPredicted RBP23.65■■□□□ 1.38
VPS16-207ENST00000481812 CIZ1Q9ULV3 898 aaPredicted RBP23.65■■□□□ 1.38
VPS16-207ENST00000481812 KIF28PB7ZC32 967 aa23.64■■□□□ 1.37
VPS16-207ENST00000481812 STAM2O75886 525 aa23.64■■□□□ 1.37
VPS16-207ENST00000481812 ZSCAN22P10073 491 aaPredicted RBP23.64■■□□□ 1.37
VPS16-207ENST00000481812 EIF2AK2P19525 551 aaKnown RBP23.64■■□□□ 1.37
VPS16-207ENST00000481812 ARHGAP4P98171 946 aa23.64■■□□□ 1.37
VPS16-207ENST00000481812 PIK3AP1Q6ZUJ8 805 aa23.64■■□□□ 1.37
VPS16-207ENST00000481812 TBCKQ8TEA7 893 aa23.64■■□□□ 1.37
VPS16-207ENST00000481812 TINF2Q9BSI4 451 aa23.64■■□□□ 1.37
VPS16-207ENST00000481812 PRDM10Q9NQV6 1147 aa23.64■■□□□ 1.37
VPS16-207ENST00000481812 LRRC37A2A6NM11 1700 aa23.64■■□□□ 1.37
VPS16-207ENST00000481812 BRD1O95696 1058 aa23.63■■□□□ 1.37
VPS16-207ENST00000481812 CCND2P30279 289 aa23.63■■□□□ 1.37
VPS16-207ENST00000481812 NUCB2P80303 420 aa23.63■■□□□ 1.37
VPS16-207ENST00000481812 STXBP2Q15833 593 aa23.63■■□□□ 1.37
VPS16-207ENST00000481812 EARS2Q5JPH6 523 aaKnown RBP23.63■■□□□ 1.37
VPS16-207ENST00000481812 CTU1Q7Z7A3 348 aaKnown RBP23.63■■□□□ 1.37
VPS16-207ENST00000481812 PGBD1Q96JS3 809 aa23.63■■□□□ 1.37
VPS16-207ENST00000481812 KIAA1217Q5T5P2 1943 aa23.63■■□□□ 1.37
VPS16-207ENST00000481812 CIITAP33076 1130 aa23.62■■□□□ 1.37
VPS16-207ENST00000481812 TRAPPC10P48553 1259 aa23.62■■□□□ 1.37
VPS16-207ENST00000481812 RESTQ13127 1097 aa23.62■■□□□ 1.37
VPS16-207ENST00000481812 MOXD1Q6UVY6 613 aa23.62■■□□□ 1.37
VPS16-207ENST00000481812 ARMCX2Q7L311 632 aa23.62■■□□□ 1.37
VPS16-207ENST00000481812 RAET1EQ8TD07 263 aa23.62■■□□□ 1.37
VPS16-207ENST00000481812 NAP1L4Q99733 375 aaKnown RBP23.62■■□□□ 1.37
VPS16-207ENST00000481812 PTPN22Q9Y2R2 807 aa23.62■■□□□ 1.37
VPS16-207ENST00000481812 EIF3JO75822 258 aaKnown RBP23.61■■□□□ 1.37
VPS16-207ENST00000481812 PDE4DQ08499 809 aa23.61■■□□□ 1.37
VPS16-207ENST00000481812 PKN2Q16513 984 aaKnown RBP23.61■■□□□ 1.37
VPS16-207ENST00000481812 INF2Q27J81 1249 aa23.61■■□□□ 1.37
VPS16-207ENST00000481812 NEK8Q86SG6 692 aa23.61■■□□□ 1.37
VPS16-207ENST00000481812 FLRT1Q9NZU1 646 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms