RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 ELP1O95163 1332 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 KIF28PB7ZC32 967 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 GOLGA6L22H0YM25 854 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 NFIBO00712 420 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 PPP6R2O75170 966 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 PTPREP23469 700 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 PRPHP41219 470 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 SNAP25P60880 206 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
SYNE1-225ENST00000481502 CRHR2Q13324 411 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 BAATQ14032 418 aaPredicted RBP9.4□□□□□ -0.9
SYNE1-225ENST00000481502 SLC39A14Q15043 492 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 MUM1L1Q5H9M0 696 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 PCNX4Q63HM2 1172 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 NSMFQ6X4W1 530 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 PIK3AP1Q6ZUJ8 805 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 PLEKHH3Q7Z736 793 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 FAM133AQ8N9E0 248 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 KCNG4Q8TDN1 519 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 MORC4Q8TE76 937 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 TBCKQ8TEA7 893 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 SOCS4Q8WXH5 440 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 CDHR1Q96JP9 859 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 MMP19Q99542 508 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 BIN2Q9UBW5 565 aaPredicted RBP9.4□□□□□ -0.9
SYNE1-225ENST00000481502 RCOR1Q9UKL0 485 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 STK24Q9Y6E0 443 aa9.4□□□□□ -0.9
SYNE1-225ENST00000481502 ASB14A6NK59 587 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 POTEB2H3BUK9 544 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 TGFB3P10600 412 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 XRCC5P13010 732 aaKnown RBP9.39□□□□□ -0.91
SYNE1-225ENST00000481502 HOXD10P28358 340 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 PRMT2P55345 433 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 ARHGAP4P98171 946 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 GRB14Q14449 540 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 KIF22Q14807 665 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 Q4G0T1 1027 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 JAKMIP3Q5VZ66 844 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 ANO1Q5XXA6 986 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 KCNV1Q6PIU1 500 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 GPR142Q7Z601 462 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 FERMT3Q86UX7 667 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 VSIG10LQ86VR7 867 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
SYNE1-225ENST00000481502 KCTD17Q8N5Z5 321 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 TMEM87AQ8NBN3 555 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 FERMT2Q96AC1 680 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 FAM20AQ96MK3 541 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 ZIC5Q96T25 663 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 RMDN3Q96TC7 470 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 PDCD2LQ9BRP1 358 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 PXMP2Q9NR77 195 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 RNF186Q9NXI6 227 aa9.39□□□□□ -0.91
SYNE1-225ENST00000481502 MEIS1O00470 390 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 SLC26A4O43511 780 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 AOC2O75106 756 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 EIF3JO75822 258 aaKnown RBP9.38□□□□□ -0.91
SYNE1-225ENST00000481502 BAG4O95429 457 aaKnown RBP9.38□□□□□ -0.91
SYNE1-225ENST00000481502 NR3C2P08235 984 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 EDNRBP24530 442 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 TOB1P50616 345 aaPredicted RBP9.38□□□□□ -0.91
SYNE1-225ENST00000481502 FCGRTP55899 365 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 SP3Q02447 781 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 PDIA5Q14554 519 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 PGM5Q15124 567 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 UBE2SQ16763 222 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 INF2Q27J81 1249 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 ZNF792Q3KQV3 632 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 GNPTABQ3T906 1256 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 CEP55Q53EZ4 464 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 TTC38Q5R3I4 469 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 ARHGEF16Q5VV41 709 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 MAMDC4Q6UXC1 1216 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 NLRX1Q86UT6 975 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 SLFN12Q8IYM2 578 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
SYNE1-225ENST00000481502 LINC00301Q8NCQ3 95 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 TBC1D5Q92609 795 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 NUDT12Q9BQG2 462 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 RAB34Q9BZG1 259 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 PORCNQ9H237 461 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 HOMER2Q9NSB8 354 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 NRBP1Q9UHY1 535 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 CPA4Q9UI42 421 aa9.38□□□□□ -0.91
SYNE1-225ENST00000481502 COL11A1P12107 1806 aaPredicted RBP9.38□□□□□ -0.91
SYNE1-225ENST00000481502 CCND2P30279 289 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 HOXA13P31271 388 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 ICAM3P32942 547 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 RGS2P41220 211 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 ALDH5A1P51649 535 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 LACTBP83111 547 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 ATP2C1P98194 919 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 GRM1Q13255 1194 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 PTPAQ15257 358 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 SF3A1Q15459 793 aaKnown RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 STXBP2Q15833 593 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms