RNA–Protein interactions for RNA: ENST00000481383.1

FXR1-215, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 909 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-215	ENST00000481383	CUX2	O14529	1486 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	VAMP4	O75379	141 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	TRIM26	Q12899	539 aa	Predicted RBP	7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	SMAD4	Q13485	552 aa	Known RBP	7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	DPY19L1	Q2PZI1	675 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	CPNE8	Q86YQ8	564 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	ZBTB8A	Q96BR9	441 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	DDX11	Q96FC9	970 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	PEX11G	Q96HA9	241 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	SYT3	Q9BQG1	590 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	KLHL25	Q9H0H3	589 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	GZF1	Q9H116	711 aa	Predicted RBP	7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	WHRN	Q9P202	907 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	CHD1	O14646	1710 aa		7.58	□□□□□ -1.2
FXR1-215	ENST00000481383	SLC9A5	Q14940	896 aa		7.57	□□□□□ -1.2
FXR1-215	ENST00000481383	ADAMTS17	Q8TE56	1095 aa		7.57	□□□□□ -1.2
FXR1-215	ENST00000481383	NUDT5	Q9UKK9	219 aa		7.57	□□□□□ -1.2
FXR1-215	ENST00000481383	SIT1	Q9Y3P8	196 aa		7.57	□□□□□ -1.2
FXR1-215	ENST00000481383	MATN3	O15232	486 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	AKAP8	O43823	692 aa	Known RBP	7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	C8B	P07358	591 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	ZNF76	P36508	570 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	WWC2	Q6AWC2	1192 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	CCDC81	Q6ZN84	652 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	LINC00482	Q8N8I6	264 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	RNF34	Q969K3	372 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	BACE2	Q9Y5Z0	518 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	TOPBP1	Q92547	1522 aa		7.56	□□□□□ -1.2
FXR1-215	ENST00000481383	SYNJ1	O43426	1573 aa		7.55	□□□□□ -1.2
FXR1-215	ENST00000481383	ZXDA	P98168	799 aa		7.55	□□□□□ -1.2
FXR1-215	ENST00000481383	FANCC	Q00597	558 aa		7.55	□□□□□ -1.2
FXR1-215	ENST00000481383	FGD4	Q96M96	766 aa		7.55	□□□□□ -1.2
FXR1-215	ENST00000481383	GORASP1	Q9BQQ3	440 aa		7.55	□□□□□ -1.2
FXR1-215	ENST00000481383	CGGBP1	Q9UFW8	167 aa	Predicted RBP	7.55	□□□□□ -1.2
FXR1-215	ENST00000481383	PCDHB10	Q9UN67	800 aa		7.55	□□□□□ -1.2
FXR1-215	ENST00000481383	CUX1	P39880	1505 aa		7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	TARBP1	Q13395	1621 aa	Known RBP	7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	C2orf71	A6NGG8	1288 aa		7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	EPHX1	P07099	455 aa		7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	SEPHS1	P49903	392 aa		7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	GNPTAB	Q3T906	1256 aa		7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	TTLL7	Q6ZT98	887 aa		7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	EIF4G3	O43432	1585 aa	Known RBP	7.54	□□□□□ -1.2
FXR1-215	ENST00000481383	TOP2B	Q02880	1626 aa		7.53	□□□□□ -1.2
FXR1-215	ENST00000481383	ZBTB7A	O95365	584 aa		7.53	□□□□□ -1.2
FXR1-215	ENST00000481383	NTRK1	P04629	796 aa		7.53	□□□□□ -1.2
FXR1-215	ENST00000481383	CPZ	Q66K79	652 aa		7.53	□□□□□ -1.2
FXR1-215	ENST00000481383	HEATR6	Q6AI08	1181 aa	Known RBP	7.53	□□□□□ -1.2
FXR1-215	ENST00000481383	LOXL4	Q96JB6	756 aa		7.53	□□□□□ -1.2
FXR1-215	ENST00000481383	C8orf49	Q96NF6	230 aa		7.53	□□□□□ -1.2
FXR1-215	ENST00000481383	GBP3	Q9H0R5	595 aa		7.53	□□□□□ -1.2
FXR1-215	ENST00000481383	C7orf72	A4D263	438 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	SMARCA5	O60264	1052 aa	Predicted RBP	7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	PLAT	P00750	562 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	FUCA1	P04066	466 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	CYP2C8	P10632	490 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	ZNF20	P17024	532 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	PAM	P19021	973 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	THBS2	P35442	1172 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	RACK1	P63244	317 aa	Known RBP	7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	AMPD2	Q01433	879 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	MBLAC2	Q68D91	279 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	ADAT2	Q7Z6V5	191 aa	Known RBP	7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	USP33	Q8TEY7	942 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	BACH2	Q9BYV9	841 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	GINM1	Q9NU53	330 aa		7.52	□□□□□ -1.21
FXR1-215	ENST00000481383	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	7.52	□□□□□ -1.21	2e-8	■■■■□ 26.1
FXR1-215	ENST00000481383	NPHP3-ACAD11	A0A0J9YXS1	232 aa		7.51	□□□□□ -1.21
FXR1-215	ENST00000481383	RGL3	Q3MIN7	710 aa		7.51	□□□□□ -1.21
FXR1-215	ENST00000481383	ARHGEF39	Q8N4T4	335 aa		7.51	□□□□□ -1.21
FXR1-215	ENST00000481383	FAM26E	Q8N5C1	309 aa		7.51	□□□□□ -1.21
FXR1-215	ENST00000481383	KLHL6	Q8WZ60	621 aa		7.51	□□□□□ -1.21
FXR1-215	ENST00000481383	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.51	□□□□□ -1.21
FXR1-215	ENST00000481383	C1QTNF3	Q9BXJ4	246 aa		7.51	□□□□□ -1.21
FXR1-215	ENST00000481383	C1QTNF3-AMACR	E9PGA6	284 aa		7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	RPL13	P26373	211 aa	Known RBP	7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	SLC7A5	Q01650	507 aa		7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	GRB10	Q13322	594 aa		7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	TTC9B	Q8N6N2	239 aa		7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	PLEKHO2	Q8TD55	490 aa		7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	SAMD11	Q96NU1	681 aa		7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	PHAX	Q9H814	394 aa	Known RBP	7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	INVS	Q9Y283	1065 aa		7.5	□□□□□ -1.21
FXR1-215	ENST00000481383	FGD5	Q6ZNL6	1462 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383		A0A1W2PQH9	124 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	NPHS1	O60500	1241 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	PPM1B	O75688	479 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	ZNF16	P17020	682 aa	Predicted RBP	7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	STK32C	Q86UX6	486 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	DPF3	Q92784	378 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	BCL11A	Q9H165	835 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	CLEC1B	Q9P126	229 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	SLC12A7	Q9Y666	1083 aa		7.49	□□□□□ -1.21
FXR1-215	ENST00000481383	SGSM2	O43147	1006 aa		7.48	□□□□□ -1.21
FXR1-215	ENST00000481383	C9orf131	Q5VYM1	1079 aa		7.48	□□□□□ -1.21
FXR1-215	ENST00000481383	ETV3L	Q6ZN32	361 aa		7.48	□□□□□ -1.21
FXR1-215	ENST00000481383	KY	Q8NBH2	561 aa		7.48	□□□□□ -1.21

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