RNA–Protein interactions for RNA: ENST00000481383.1

FXR1-215, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 909 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-215ENST00000481383 AEBP2Q6ZN18 517 aaPredicted RBP33.56■■■□□ 2.96
FXR1-215ENST00000481383 CHIC1Q5VXU3 224 aa31.82■■■□□ 2.68
FXR1-215ENST00000481383 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
FXR1-215ENST00000481383 PHF23Q9BUL5 403 aaPredicted RBP28.19■■■□□ 2.1
FXR1-215ENST00000481383 FOXD1Q16676 465 aa26.64■■□□□ 1.86
FXR1-215ENST00000481383 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.66
FXR1-215ENST00000481383 PPP6R1Q9UPN7 881 aa24.96■■□□□ 1.59
FXR1-215ENST00000481383 PIAS4Q8N2W9 510 aaPredicted RBP24.88■■□□□ 1.57
FXR1-215ENST00000481383 ADRA2BP18089 450 aa24.87■■□□□ 1.57
FXR1-215ENST00000481383 MSH5O43196 834 aa24.85■■□□□ 1.57
FXR1-215ENST00000481383 POTEDQ86YR6 584 aa24.29■■□□□ 1.48
FXR1-215ENST00000481383 MAPK8IP2Q13387 824 aaPredicted RBP22.85■■□□□ 1.25
FXR1-215ENST00000481383 DMRT2Q9Y5R5 561 aa22.65■■□□□ 1.22
FXR1-215ENST00000481383 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
FXR1-215ENST00000481383 PPP4R3CPQ6ZMV5 832 aa22.3■■□□□ 1.16
FXR1-215ENST00000481383 CNKSR2Q8WXI2 1034 aa21.84■■□□□ 1.09
FXR1-215ENST00000481383 HOXD11P31277 338 aaPredicted RBP21.82■■□□□ 1.08
FXR1-215ENST00000481383 DCAF8L1A6NGE4 600 aa21.71■■□□□ 1.07
FXR1-215ENST00000481383 RNF216Q9NWF9 866 aaPredicted RBP21.64■■□□□ 1.05
FXR1-215ENST00000481383 NCBP3Q53F19 620 aaKnown RBP21.38■■□□□ 1.01
FXR1-215ENST00000481383 CACNB1Q02641 598 aaPredicted RBP21.34■■□□□ 1.01
FXR1-215ENST00000481383 RNF39Q9H2S5 420 aa21.25■□□□□ 0.99
FXR1-215ENST00000481383 NPM3O75607 178 aaKnown RBP21.16■□□□□ 0.98
FXR1-215ENST00000481383 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
FXR1-215ENST00000481383 C1QBPQ07021 282 aaKnown RBP20.9■□□□□ 0.94
FXR1-215ENST00000481383 KCNA4P22459 653 aa20.79■□□□□ 0.92
FXR1-215ENST00000481383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.92
FXR1-215ENST00000481383 U3KPZ7 1027 aaPredicted RBP20.39■□□□□ 0.85
FXR1-215ENST00000481383 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
FXR1-215ENST00000481383 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
FXR1-215ENST00000481383 CAPN15O75808 1086 aa20.01■□□□□ 0.79
FXR1-215ENST00000481383 DSG3P32926 999 aa19.92■□□□□ 0.78
FXR1-215ENST00000481383 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
FXR1-215ENST00000481383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
FXR1-215ENST00000481383 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
FXR1-215ENST00000481383 APLP2Q06481 763 aa19.69■□□□□ 0.74
FXR1-215ENST00000481383 ZNF219Q9P2Y4 722 aaPredicted RBP19.63■□□□□ 0.73
FXR1-215ENST00000481383 SAMD1Q6SPF0 538 aaPredicted RBP19.62■□□□□ 0.73
FXR1-215ENST00000481383 ABCB7O75027 752 aa19.6■□□□□ 0.73
FXR1-215ENST00000481383 SLC4A1APQ9BWU0 796 aaKnown RBP19.59■□□□□ 0.73
FXR1-215ENST00000481383 MYCNP04198 464 aaPredicted RBP19.52■□□□□ 0.72
FXR1-215ENST00000481383 FOXD4L1Q9NU39 408 aa19.35■□□□□ 0.69
FXR1-215ENST00000481383 POLA2Q14181 598 aa19.18■□□□□ 0.66
FXR1-215ENST00000481383 ZBTB22O15209 634 aa19.16■□□□□ 0.66
FXR1-215ENST00000481383 ATF5Q9Y2D1 282 aaPredicted RBP19.16■□□□□ 0.66
FXR1-215ENST00000481383 POTEHQ6S545 545 aa19.03■□□□□ 0.64
FXR1-215ENST00000481383 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
FXR1-215ENST00000481383 ZBTB12Q9Y330 459 aaPredicted RBP18.72■□□□□ 0.59
FXR1-215ENST00000481383 ATXN8OSP0DMR3 200 aa18.71■□□□□ 0.59
FXR1-215ENST00000481383 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
FXR1-215ENST00000481383 CHRDL2Q6WN34 429 aa18.56■□□□□ 0.56
FXR1-215ENST00000481383 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
FXR1-215ENST00000481383 REM2Q8IYK8 340 aaPredicted RBP18.39■□□□□ 0.53
FXR1-215ENST00000481383 FBLN2P98095 1184 aa18.29■□□□□ 0.52
FXR1-215ENST00000481383 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
FXR1-215ENST00000481383 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
FXR1-215ENST00000481383 PITPNM1O00562 1244 aa18.21■□□□□ 0.51
FXR1-215ENST00000481383 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
FXR1-215ENST00000481383 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
FXR1-215ENST00000481383 SPDYE2Q495Y8 402 aa18.19■□□□□ 0.5
FXR1-215ENST00000481383 PIP4P2Q8N4L2 257 aa18.15■□□□□ 0.5
FXR1-215ENST00000481383 FXR2P51116 673 aaKnown RBP eCLIP18.03■□□□□ 0.48
FXR1-215ENST00000481383 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
FXR1-215ENST00000481383 SSUH2Q9Y2M2 353 aa17.99■□□□□ 0.47
FXR1-215ENST00000481383 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
FXR1-215ENST00000481383 SPDYE1Q8NFV5 336 aaPredicted RBP17.86■□□□□ 0.45
FXR1-215ENST00000481383 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
FXR1-215ENST00000481383 SP7Q8TDD2 431 aaPredicted RBP17.84■□□□□ 0.45
FXR1-215ENST00000481383 HAX1O00165 279 aa17.78■□□□□ 0.44
FXR1-215ENST00000481383 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
FXR1-215ENST00000481383 PRKAR2AP13861 404 aaKnown RBP17.72■□□□□ 0.43
FXR1-215ENST00000481383 EVX2Q03828 476 aa17.64■□□□□ 0.41
FXR1-215ENST00000481383 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
FXR1-215ENST00000481383 PRR29P0C7W0 189 aa17.54■□□□□ 0.4
FXR1-215ENST00000481383 C19orf67A6NJJ6 358 aa17.45■□□□□ 0.38
FXR1-215ENST00000481383 SPDYE4A6NLX3 237 aa17.36■□□□□ 0.37
FXR1-215ENST00000481383 FARP1Q9Y4F1 1045 aaPredicted RBP17.26■□□□□ 0.35
FXR1-215ENST00000481383 GABBR2O75899 941 aa17.19■□□□□ 0.34
FXR1-215ENST00000481383 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
FXR1-215ENST00000481383 CREBZFQ9NS37 354 aa17.17■□□□□ 0.34
FXR1-215ENST00000481383 CD44P16070 742 aaKnown RBP17.16■□□□□ 0.34
FXR1-215ENST00000481383 PROM2Q8N271 834 aa16.96■□□□□ 0.31
FXR1-215ENST00000481383 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
FXR1-215ENST00000481383 MNX1P50219 401 aaPredicted RBP16.89■□□□□ 0.29
FXR1-215ENST00000481383 ZNF579Q8NAF0 562 aaKnown RBP16.89■□□□□ 0.29
FXR1-215ENST00000481383 POTEIP0CG38 1075 aa16.87■□□□□ 0.29
FXR1-215ENST00000481383 CLCN6P51797 869 aa16.82■□□□□ 0.28
FXR1-215ENST00000481383 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
FXR1-215ENST00000481383 LHX8Q68G74 356 aa16.73■□□□□ 0.27
FXR1-215ENST00000481383 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
FXR1-215ENST00000481383 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
FXR1-215ENST00000481383 PHF12Q96QT6 1004 aa16.72■□□□□ 0.27
FXR1-215ENST00000481383 DCBLD2Q96PD2 775 aa16.69■□□□□ 0.26
FXR1-215ENST00000481383 FKBP8Q14318 412 aa16.54■□□□□ 0.24
FXR1-215ENST00000481383 MIER1Q8N108 512 aa16.54■□□□□ 0.24
FXR1-215ENST00000481383 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
FXR1-215ENST00000481383 MS4A3Q96HJ5 214 aa16.49■□□□□ 0.23
FXR1-215ENST00000481383 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.23
FXR1-215ENST00000481383 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
FXR1-215ENST00000481383 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms