RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 DDX49Q9Y6V7 483 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 CUL9Q8IWT3 2517 aa14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 GRIN2DO15399 1336 aa14.13□□□□□ -0.15
SQSTM1-207ENST00000481335 PALM3A6NDB9 673 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 KLRF2D3W0D1 207 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 ZBTB5O15062 677 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 B4GALT4O60513 344 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 PFKMP08237 780 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 TXNP10599 105 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 CSF2RAP15509 400 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 STXBP2Q15833 593 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 TMEM240Q5SV17 173 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 NFRKBQ6P4R8 1299 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 PPP1R12CQ9BZL4 782 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 ALDH8A1Q9H2A2 487 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 CPVLQ9H3G5 476 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 SEMA6BQ9H3T3 888 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 IL23AQ9NPF7 189 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 MAD2L2Q9UI95 211 aa14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 BAZ2BQ9UIF8 2168 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-207ENST00000481335 HSD17B4P51659 736 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 CCDC62Q6P9F0 684 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 CYB5R4Q7L1T6 521 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 RPUSD2Q8IZ73 545 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 HERVK_113Q902F9 699 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 MAP4K1Q92918 833 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 RMDN3Q96TC7 470 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 MAP3K14Q99558 947 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 NOC4LQ9BVI4 516 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 MYH7BA7E2Y1 1941 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 EYSQ5T1H1 3165 aa14.11□□□□□ -0.15
SQSTM1-207ENST00000481335 E7EWF7 191 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 IFIT3O14879 490 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 EIF3JO75822 258 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 GH1P01241 217 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 DNAJB2P25686 324 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 PTH1RQ03431 593 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 GRM4Q14833 912 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 WTAPQ15007 396 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 TMEM63BQ5T3F8 832 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 ARHGEF16Q5VV41 709 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 KCNV1Q6PIU1 500 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 STAG2Q8N3U4 1231 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 EMID1Q96A84 441 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 CDX2Q99626 313 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 TTYH1Q9H313 450 aaPredicted RBP14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 RIOX1Q9H6W3 641 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 PXMP2Q9NR77 195 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 MYO9BQ13459 2157 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 GBF1Q92538 1859 aa14.1□□□□□ -0.15
SQSTM1-207ENST00000481335 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 MYL3P08590 195 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 PTGS1P23219 599 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 CYP2C18P33260 490 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 RFC2P35250 354 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 PSMC6P62333 389 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 TROAPQ12815 778 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 ZNF365Q70YC5 407 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 C16orf59Q7L2K0 433 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 SESTD1Q86VW0 696 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 TAAR1Q96RJ0 339 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 VAT1LQ9HCJ6 419 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 COL20A1Q9P218 1284 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 PCDHA1Q9Y5I3 950 aa14.09□□□□□ -0.15
SQSTM1-207ENST00000481335 DDAH1O94760 285 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 ARIH2O95376 493 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 CFBP00751 764 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 FGBP02675 491 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 NR3C2P08235 984 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 SMARCA1P28370 1054 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 RAB30Q15771 203 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 STOX1Q6ZVD7 989 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 CATIPQ7Z7H3 387 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 TIFAQ96CG3 184 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 FAM161BQ96MY7 647 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 KATNAL1Q9BW62 490 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 TRPV6Q9H1D0 765 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 WNT8AQ9H1J5 351 aa14.08□□□□□ -0.16
SQSTM1-207ENST00000481335 TRIP12Q14669 1992 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 PNMA6FA0A0J9YX94 578 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 OPLAHO14841 1288 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 MMP3P08254 477 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 TGFB3P10600 412 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 CASTP20810 708 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 KIF5BP33176 963 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 ARHGAP1Q07960 439 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 BFSP2Q13515 415 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 DGKDQ16760 1214 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 NBPF20Q3BBV1 942 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 TMEM67Q5HYA8 995 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 SEPT14Q6ZU15 432 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 MB21D2Q8IYB1 491 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 CCDC155Q8N6L0 562 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 TBC1D5Q92609 795 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 COPS5Q92905 334 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 PDCD2LQ9BRP1 358 aa14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 DDX41Q9UJV9 622 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-207ENST00000481335 RBM8AQ9Y5S9 174 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms