RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
CBX3-206ENST00000481057 TRPM3Q9HCF6 1732 aaPredicted RBP9.37□□□□□ -0.91
CBX3-206ENST00000481057 LRRN2O75325 713 aa9.37□□□□□ -0.91
CBX3-206ENST00000481057 PPFIBP1Q86W92 1011 aa9.37□□□□□ -0.91
CBX3-206ENST00000481057 DTX1Q86Y01 620 aa9.37□□□□□ -0.91
CBX3-206ENST00000481057 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
CBX3-206ENST00000481057 ACTR10Q9NZ32 417 aa9.37□□□□□ -0.91
CBX3-206ENST00000481057 WDR33Q9C0J8 1336 aaKnown RBP9.36□□□□□ -0.91
CBX3-206ENST00000481057 TMEM265A0A087WTH1 108 aa9.36□□□□□ -0.91
CBX3-206ENST00000481057 LRP8Q14114 963 aa9.36□□□□□ -0.91
CBX3-206ENST00000481057 PHAXQ9H814 394 aaKnown RBP9.36□□□□□ -0.91
CBX3-206ENST00000481057 ZNF214Q9UL59 606 aaPredicted RBP9.36□□□□□ -0.91
CBX3-206ENST00000481057 KCNH3Q9ULD8 1083 aa9.36□□□□□ -0.91
CBX3-206ENST00000481057 SNX11Q9Y5W9 270 aa9.36□□□□□ -0.91
CBX3-206ENST00000481057 ST14Q9Y5Y6 855 aa9.36□□□□□ -0.91
CBX3-206ENST00000481057 CRB1P82279 1406 aa9.36□□□□□ -0.91
CBX3-206ENST00000481057 C9IYK1 514 aa9.35□□□□□ -0.91
CBX3-206ENST00000481057 STK10O94804 968 aaKnown RBP9.35□□□□□ -0.91
CBX3-206ENST00000481057 PRNPP04156 253 aa9.35□□□□□ -0.91
CBX3-206ENST00000481057 EEA1Q15075 1411 aa9.35□□□□□ -0.91
CBX3-206ENST00000481057 TDRD10Q5VZ19 366 aaKnown RBP9.35□□□□□ -0.91
CBX3-206ENST00000481057 SMARCC1Q92922 1105 aaPredicted RBP9.35□□□□□ -0.91
CBX3-206ENST00000481057 ARMC5Q96C12 935 aa9.35□□□□□ -0.91
CBX3-206ENST00000481057 MKRN2Q9H000 416 aaKnown RBP9.35□□□□□ -0.91
CBX3-206ENST00000481057 ANKRD30BQ9BXX2 1392 aa9.35□□□□□ -0.91
CBX3-206ENST00000481057 CASP8AP2Q9UKL3 1982 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 DEFB115Q30KQ5 88 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 NBPF9Q3BBW0 867 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 BBS9Q3SYG4 887 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 CDKAL1Q5VV42 579 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 ANKS3Q6ZW76 656 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 HNRNPLLQ8WVV9 542 aaKnown RBP9.34□□□□□ -0.91
CBX3-206ENST00000481057 MISP3Q96FF7 219 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 HRASLS5Q96KN8 279 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 HSPA12BQ96MM6 686 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 NHSQ6T4R5 1651 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 GPRASP1Q5JY77 1395 aa9.34□□□□□ -0.91
CBX3-206ENST00000481057 USP6P35125 1406 aa9.33□□□□□ -0.92
CBX3-206ENST00000481057 GLTPD2A6NH11 291 aa9.33□□□□□ -0.92
CBX3-206ENST00000481057 GTF2F1P35269 517 aaKnown RBP eCLIP9.33□□□□□ -0.92
CBX3-206ENST00000481057 PRKCQQ04759 706 aa9.33□□□□□ -0.92
CBX3-206ENST00000481057 VSIG10LQ86VR7 867 aa9.33□□□□□ -0.92
CBX3-206ENST00000481057 DHX38Q92620 1227 aaKnown RBP9.33□□□□□ -0.92
CBX3-206ENST00000481057 SEMA3GQ9NS98 782 aa9.33□□□□□ -0.92
CBX3-206ENST00000481057 PCMTD2Q9NV79 361 aa9.33□□□□□ -0.92
CBX3-206ENST00000481057 PCDHB10Q9UN67 800 aa9.33□□□□□ -0.92
CBX3-206ENST00000481057 CLTCL1P53675 1640 aa9.33□□□□□ -0.92
CBX3-206ENST00000481057 RASSF10A6NK89 507 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 H3BS24 57 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 KLF4O43474 513 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 SRFP11831 508 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 THAP5Q7Z6K1 395 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 CCDC144CPQ8IYA2 1237 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 STK11IPQ8N1F8 1099 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 BCL7CQ8WUZ0 217 aaPredicted RBP9.32□□□□□ -0.92
CBX3-206ENST00000481057 KLHL6Q8WZ60 621 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 GPR62Q9BZJ7 368 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 CCDC39Q9UFE4 941 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 VAV3Q9UKW4 847 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 PLEKHH1Q9ULM0 1364 aa9.32□□□□□ -0.92
CBX3-206ENST00000481057 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 BTAF1O14981 1849 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 EXOC5O00471 708 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 SHOXO15266 292 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 SLC7A5Q01650 507 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 SNW1Q13573 536 aaKnown RBP9.31□□□□□ -0.92
CBX3-206ENST00000481057 AOC3Q16853 763 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 GNPTABQ3T906 1256 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 AXDND1Q5T1B0 1012 aaPredicted RBP9.31□□□□□ -0.92
CBX3-206ENST00000481057 LARP1BQ659C4 914 aaKnown RBP9.31□□□□□ -0.92
CBX3-206ENST00000481057 VHLLQ6RSH7 139 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 WFDC3Q8IUB2 231 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 SNX27Q96L92 541 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 DUSP15Q9H1R2 295 aaPredicted RBP9.31□□□□□ -0.92
CBX3-206ENST00000481057 FAM86C1Q9NVL1 165 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 COL5A2P05997 1499 aaPredicted RBP9.31□□□□□ -0.92
CBX3-206ENST00000481057 LMO7Q8WWI1 1683 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 TRPM1Q7Z4N2 1603 aa9.31□□□□□ -0.92
CBX3-206ENST00000481057 A0A0G2JLW4 131 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 SCO2A0A1W2PP80 73 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 SHISA3A0PJX4 238 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 HYAL3O43820 417 aaPredicted RBP9.3□□□□□ -0.92
CBX3-206ENST00000481057 TP53P04637 393 aaPredicted RBP9.3□□□□□ -0.92
CBX3-206ENST00000481057 AUHQ13825 339 aaKnown RBP9.3□□□□□ -0.92
CBX3-206ENST00000481057 DCAF15Q66K64 600 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 NFXL1Q6ZNB6 911 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 CKAP2LQ8IYA6 745 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 C7orf61Q8IZ16 206 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 PRDM14Q9GZV8 571 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 TRIT1Q9H3H1 467 aaKnown RBP9.3□□□□□ -0.92
CBX3-206ENST00000481057 STK26Q9P289 416 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 SLC5A6Q9Y289 635 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 R3HCC1Q9Y3T6 440 aaKnown RBP9.3□□□□□ -0.92
CBX3-206ENST00000481057 PCDHB12Q9Y5F1 795 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
CBX3-206ENST00000481057 BNIP3Q12983 259 aa9.29□□□□□ -0.92
CBX3-206ENST00000481057 NMIQ13287 307 aaPredicted RBP9.29□□□□□ -0.92
CBX3-206ENST00000481057 ARTNQ5T4W7 220 aa9.29□□□□□ -0.92
CBX3-206ENST00000481057 TOM1L2Q6ZVM7 507 aa9.29□□□□□ -0.92
CBX3-206ENST00000481057 TMC3Q7Z5M5 1100 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms