RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 VWA3AA6NCI4 1184 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 TDP2O95551 362 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 NDUFA8P51970 172 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 HUNKP57058 714 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 HERVK_113P62684 666 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 CALCRLQ16602 461 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 MS4A4AQ96JQ5 239 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 AK8Q96MA6 479 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 MTMR9Q96QG7 549 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 PYM1Q9BRP8 204 aaKnown RBP16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 TNMDQ9H2S6 317 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 ACAD9Q9H845 621 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 HOMER2Q9NSB8 354 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 FBXO40Q9UH90 709 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.28
SNRNP200-205ENST00000480835 TBX3O15119 743 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 ZNF202O95125 648 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 GRIN1Q05586 938 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 TMEM266Q2M3C6 531 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 Q4G0T1 1027 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 RNF207Q6ZRF8 634 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 ANKRD23Q86SG2 305 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 RIOX2Q8IUF8 465 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 SMC1BQ8NDV3 1235 aa16.76■□□□□ 0.27
SNRNP200-205ENST00000480835 FRMPD4Q14CM0 1322 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 RPTORQ8N122 1335 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 CCL15-CCL14A0A0B4J2E2 113 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 KIF3CO14782 793 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 SLC37A4O43826 429 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 SLC25A27O95847 323 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 ZNF76P36508 570 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 TXLNAP40222 546 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 RPS6P62753 249 aaKnown RBP16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 PLS1Q14651 629 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 CCL15Q16663 113 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 ELOA2Q8IYF1 753 aaPredicted RBP16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 SYTL5Q8TDW5 730 aaPredicted RBP16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 RAB34Q9BZG1 259 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 SPATC1LQ9H0A9 340 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 BTBD7Q9P203 1132 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 USP25Q9UHP3 1055 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 RIPK3Q9Y572 518 aa16.75■□□□□ 0.27
SNRNP200-205ENST00000480835 UTRNP46939 3433 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 MARCH6O60337 910 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.272e-8■■■■□ 19.4
SNRNP200-205ENST00000480835 PDIA5Q14554 519 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 GSE1Q14687 1217 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 IL17AQ16552 155 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 NSMFQ6X4W1 530 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 RBM43Q6ZSC3 357 aaKnown RBP16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 SLFN12Q8IYM2 578 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 SYMPKQ92797 1274 aaKnown RBP16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 CCDC34Q96HJ3 373 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 CCSER1Q9C0I3 900 aa16.74■□□□□ 0.27
SNRNP200-205ENST00000480835 SYCE3A1L190 88 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 TESPA1A2RU30 521 aaPredicted RBP16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 BAATQ14032 418 aaPredicted RBP16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 SPECC1Q5M775 1068 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 KANK3Q6NY19 840 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 XRRA1Q6P2D8 792 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 LRSAM1Q6UWE0 723 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 NIPA1Q7RTP0 329 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 RASAL3Q86YV0 1011 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 BRI3BPQ8WY22 251 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 FAM20AQ96MK3 541 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 KCNMB3Q9NPA1 279 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 HOOK1Q9UJC3 728 aaKnown RBP16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 SRCAPQ6ZRS2 3230 aa16.73■□□□□ 0.27
SNRNP200-205ENST00000480835 PFASO15067 1338 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 MANSC4A6NHS7 340 aaPredicted RBP16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 BTBD19C9JJ37 291 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 PDHXO00330 501 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 SLC26A4O43511 780 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 CNMDO75829 334 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 TXKP42681 527 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 GCLCP48506 637 aaPredicted RBP16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 ZNF157P51786 506 aaPredicted RBP16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 SETQ01105 290 aaPredicted RBP16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 PRR16Q569H4 304 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 PCNX4Q63HM2 1172 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 RGMBQ6NW40 437 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 POTEEQ6S8J3 1075 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 SLC30A10Q6XR72 485 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 IGSF22Q8N9C0 903 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 EPSTI1Q96J88 318 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 PAGR1Q9BTK6 254 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 ZCCHC17Q9NP64 241 aaKnown RBP16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 COL20A1Q9P218 1284 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 TLL2Q9Y6L7 1015 aa16.72■□□□□ 0.27
SNRNP200-205ENST00000480835 POLR2DO15514 142 aaKnown RBP16.71■□□□□ 0.27
SNRNP200-205ENST00000480835 BCRP11274 1271 aa16.71■□□□□ 0.27
SNRNP200-205ENST00000480835 UBA7P41226 1012 aa16.71■□□□□ 0.27
SNRNP200-205ENST00000480835 CAMK4Q16566 473 aa16.71■□□□□ 0.27
SNRNP200-205ENST00000480835 CEP55Q53EZ4 464 aa16.71■□□□□ 0.27
SNRNP200-205ENST00000480835 KRBA2Q6ZNG9 492 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms