RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 RPN1P04843 607 aaKnown RBP18.83■□□□□ 0.6
SH3D21-203ENST00000480549 SKILP12757 684 aa18.83■□□□□ 0.6
SH3D21-203ENST00000480549 SPATA1Q5VX52 437 aa18.83■□□□□ 0.6
SH3D21-203ENST00000480549 CABP7Q86V35 215 aa18.83■□□□□ 0.6
SH3D21-203ENST00000480549 FAM151AQ8WW52 585 aa18.83■□□□□ 0.6
SH3D21-203ENST00000480549 MMTAG2Q9BU76 263 aaKnown RBP18.83■□□□□ 0.6
SH3D21-203ENST00000480549 NDUFB10O96000 172 aa18.83■□□□□ 0.6
SH3D21-203ENST00000480549 TECP42680 631 aa18.83■□□□□ 0.6
SH3D21-203ENST00000480549 CDC37Q16543 378 aaPredicted RBP18.83■□□□□ 0.6
SH3D21-203ENST00000480549 KLHL10Q6JEL2 608 aa18.83■□□□□ 0.6
SH3D21-203ENST00000480549 TMCO3Q6UWJ1 677 aa18.83■□□□□ 0.6
SH3D21-203ENST00000480549 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.6
SH3D21-203ENST00000480549 A0A1W2PRG0 241 aa18.82■□□□□ 0.6
SH3D21-203ENST00000480549 OAS2P29728 719 aaKnown RBP18.82■□□□□ 0.6
SH3D21-203ENST00000480549 LMAN1P49257 510 aa18.82■□□□□ 0.6
SH3D21-203ENST00000480549 CCDC150Q8NCX0 1101 aa18.82■□□□□ 0.6
SH3D21-203ENST00000480549 PLIN2Q99541 437 aa18.82■□□□□ 0.6
SH3D21-203ENST00000480549 NUP88Q99567 741 aaPredicted RBP18.82■□□□□ 0.6
SH3D21-203ENST00000480549 PLCG1P19174 1290 aa18.82■□□□□ 0.6
SH3D21-203ENST00000480549 TNNI2P48788 182 aa18.82■□□□□ 0.6
SH3D21-203ENST00000480549 MRPL12P52815 198 aaKnown RBP18.82■□□□□ 0.6
SH3D21-203ENST00000480549 ZNF658Q5TYW1 1059 aaPredicted RBP18.82■□□□□ 0.6
SH3D21-203ENST00000480549 PSTPIP2Q9H939 334 aa18.82■□□□□ 0.6
SH3D21-203ENST00000480549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.82■□□□□ 0.6
SH3D21-203ENST00000480549 SEC31AO94979 1220 aaKnown RBP18.81■□□□□ 0.6
SH3D21-203ENST00000480549 STX17P56962 302 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 CALCRLQ16602 461 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 APTXQ7Z2E3 356 aaKnown RBP18.81■□□□□ 0.6
SH3D21-203ENST00000480549 NIM1KQ8IY84 436 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 OGFOD1Q8N543 542 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 RASSF8Q8NHQ8 419 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 DNAJC21Q5F1R6 531 aaKnown RBP18.81■□□□□ 0.6
SH3D21-203ENST00000480549 CDKAL1Q5VV42 579 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 PPP4R3AQ6IN85 833 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 MTMR14Q8NCE2 650 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 RMND1Q9NWS8 449 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 PIM2Q9P1W9 311 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 KLRC4O43908 158 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 TXKP42681 527 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 FXR2P51116 673 aaKnown RBP eCLIP18.81■□□□□ 0.6
SH3D21-203ENST00000480549 TGFB2P61812 414 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 PTPN21Q16825 1174 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 AGBL3Q8NEM8 1001 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 CUEDC2Q9H467 287 aa18.81■□□□□ 0.6
SH3D21-203ENST00000480549 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
SH3D21-203ENST00000480549 MYL1P05976 194 aa18.8■□□□□ 0.6
SH3D21-203ENST00000480549 CTNND2Q9UQB3 1225 aa18.8■□□□□ 0.6
SH3D21-203ENST00000480549 PCDHA1Q9Y5I3 950 aa18.8■□□□□ 0.6
SH3D21-203ENST00000480549 ZBED3Q96IU2 234 aaPredicted RBP18.8■□□□□ 0.6
SH3D21-203ENST00000480549 CXorf56Q9H5V9 222 aa18.8■□□□□ 0.6
SH3D21-203ENST00000480549 MAGEF1Q9HAY2 307 aa18.8■□□□□ 0.6
SH3D21-203ENST00000480549 SYNPO2Q9UMS6 1093 aa18.8■□□□□ 0.6
SH3D21-203ENST00000480549 CXCL9Q07325 125 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 CDAN1Q8IWY9 1227 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 GOLGA5Q8TBA6 731 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 FAM212AQ96EL1 285 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 GDAQ9Y2T3 454 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 SFPQP23246 707 aaKnown RBP eCLIP18.79■□□□□ 0.6
SH3D21-203ENST00000480549 KCNB1Q14721 858 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 FKBP1CQ5VVH2 108 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 NYAP1Q6ZVC0 841 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L15C9J2P7 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L13C9JLJ4 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L11C9JVI0 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L18D6R9N7 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L22D6RA61 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L17D6RBQ6 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L19D6RCP7 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L20D6RJB6 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L24Q0WX57 530 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 DHX8Q14562 1220 aaKnown RBP18.79■□□□□ 0.6
SH3D21-203ENST00000480549 USP17L6PQ6QN14 398 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 BTNL9Q6UXG8 535 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 FBXO41Q8TF61 875 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 RWDD2AQ9UIY3 292 aa18.79■□□□□ 0.6
SH3D21-203ENST00000480549 A0A1B0GTH6 734 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 BMP3P12645 472 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 SNAP25P60880 206 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 TBX2Q13207 712 aaPredicted RBP18.78■□□□□ 0.6
SH3D21-203ENST00000480549 NR1I3Q14994 352 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 GLT8D2Q9H1C3 349 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 ANKRD65E5RJM6 399 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 ECE1P42892 770 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 SYDE2Q5VT97 1194 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 KCND1Q9NSA2 647 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 PGAP2Q9UHJ9 254 aa18.78■□□□□ 0.6
SH3D21-203ENST00000480549 PRCPP42785 496 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 KIAA1755Q5JYT7 1200 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 HAS1Q92839 578 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 TMEM39BQ9GZU3 492 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 VEZTQ9HBM0 779 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 ARGLU1Q9NWB6 273 aaPredicted RBP18.77■□□□□ 0.6
SH3D21-203ENST00000480549 MEIS2O14770 477 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 COBLO75128 1261 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 RHOBTB3O94955 611 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 GRB10Q13322 594 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 P2RX7Q99572 595 aaKnown RBP18.77■□□□□ 0.6
SH3D21-203ENST00000480549 LRWD1Q9UFC0 647 aa18.77■□□□□ 0.6
SH3D21-203ENST00000480549 DDX25Q9UHL0 483 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms