RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 FEM1BQ9UK73 627 aa12.8□□□□□ -0.36
CCDC58-205ENST00000479899 YBX2Q9Y2T7 364 aaKnown RBP12.8□□□□□ -0.36
CCDC58-205ENST00000479899 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 ZBBXA8MT70 800 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 TMEM232C9JQI7 657 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 ATP2A1O14983 1001 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 CTAGE5O15320 804 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 GPAA1O43292 621 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 TTLL1O95922 423 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 FGBP02675 491 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 CFHP08603 1231 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 TSPY3P0CV98 308 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 TSPY8P0CW00 308 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 BMP3P12645 472 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 SNAP25P60880 206 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 PSMC6P62333 389 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 AKNAD1Q5T1N1 836 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 RASIP1Q5U651 963 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 ATXN2LQ8WWM7 1075 aaKnown RBP12.79□□□□□ -0.36
CCDC58-205ENST00000479899 APPBP2Q92624 585 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 AGBL1Q96MI9 1066 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 UHRF1Q96T88 793 aaPredicted RBP12.79□□□□□ -0.36
CCDC58-205ENST00000479899 KATNBL1Q9H079 304 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 A1CFQ9NQ94 594 aaKnown RBP12.79□□□□□ -0.36
CCDC58-205ENST00000479899 MTMR7Q9Y216 660 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 ASTN1O14525 1302 aa12.79□□□□□ -0.36
CCDC58-205ENST00000479899 CD4P01730 458 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 ALAS1P13196 640 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 MYOGP15173 224 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 CD46P15529 392 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 SSTR3P32745 418 aaPredicted RBP12.78□□□□□ -0.36
CCDC58-205ENST00000479899 STAT2P52630 851 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 OAZ1P54368 228 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 ITGA7Q13683 1181 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 FSCN1Q16658 493 aaKnown RBP12.78□□□□□ -0.36
CCDC58-205ENST00000479899 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 RASGRP2Q7LDG7 609 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 FBXO16Q8IX29 292 aaPredicted RBP12.78□□□□□ -0.36
CCDC58-205ENST00000479899 KBTBD3Q8NAB2 608 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 GMCL1P1Q8NEA9 526 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 HERVK_113Q902F9 699 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 AP5M1Q9H0R1 490 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 TRPV6Q9H1D0 765 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 WNT8AQ9H1J5 351 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 ZNF287Q9HBT7 754 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 MTMR4Q9NYA4 1195 aa12.78□□□□□ -0.36
CCDC58-205ENST00000479899 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.37
CCDC58-205ENST00000479899 DYNC1LI2O43237 492 aaPredicted RBP12.77□□□□□ -0.37
CCDC58-205ENST00000479899 B4GALT4O60513 344 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 SMPD1P17405 629 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 GCGRP47871 477 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 MRPS5P82675 430 aaKnown RBP12.77□□□□□ -0.37
CCDC58-205ENST00000479899 SKIV2LQ15477 1246 aaKnown RBP12.77□□□□□ -0.37
CCDC58-205ENST00000479899 TMEM63BQ5T3F8 832 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 GIMAP6Q6P9H5 292 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 FAM133AQ8N9E0 248 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 SCLYQ96I15 445 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 GPATCH3Q96I76 525 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.37
CCDC58-205ENST00000479899 PURBQ96QR8 312 aaKnown RBP12.77□□□□□ -0.37
CCDC58-205ENST00000479899 PDGFCQ9NRA1 345 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 LCTP09848 1927 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 TRANK1O15050 2925 aa12.77□□□□□ -0.37
CCDC58-205ENST00000479899 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 ASB14A6NK59 587 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 ACTN4O43707 911 aaKnown RBP12.76□□□□□ -0.37
CCDC58-205ENST00000479899 ZEB2O60315 1214 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 CABYRO75952 493 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 MCCP23508 829 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 SLC1A4P43007 532 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 TFAP4Q01664 338 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 MUM1L1Q5H9M0 696 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 NSMFQ6X4W1 530 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 KCTD1Q719H9 257 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 TRERF1Q96PN7 1200 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
CCDC58-205ENST00000479899 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
CCDC58-205ENST00000479899 STX8Q9UNK0 236 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 GNEQ9Y223 722 aaKnown RBP12.76□□□□□ -0.37
CCDC58-205ENST00000479899 SLC4A7Q9Y6M7 1214 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 GRIN2DO15399 1336 aa12.76□□□□□ -0.37
CCDC58-205ENST00000479899 ZNF536O15090 1300 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 GNAT2P19087 354 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 PDE4BQ07343 736 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 FAM160B2Q86V87 743 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 IFNL3Q8IZI9 196 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 SLC43A3Q8NBI5 491 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 PPP1R13LQ8WUF5 828 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 CHURC1Q8WUH1 139 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 MKL1Q969V6 931 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 PLIN4Q96Q06 1357 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 NAPBQ9H115 298 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 CHMP4BQ9H444 224 aaKnown RBP12.75□□□□□ -0.37
CCDC58-205ENST00000479899 CERS4Q9HA82 394 aa12.75□□□□□ -0.37
CCDC58-205ENST00000479899 TCF20Q9UGU0 1960 aaKnown RBP12.75□□□□□ -0.37
CCDC58-205ENST00000479899 SCN5AQ14524 2016 aa12.74□□□□□ -0.37
CCDC58-205ENST00000479899 RFXAPO00287 272 aa12.74□□□□□ -0.37
CCDC58-205ENST00000479899 SLC3A2P08195 630 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms