RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 MTUS1Q9ULD2 1270 aa11.59□□□□□ -0.55
GPNMB-211ENST00000479625 COG6Q9Y2V7 657 aa11.59□□□□□ -0.55
GPNMB-211ENST00000479625 MICAL3Q7RTP6 2002 aa11.59□□□□□ -0.55
GPNMB-211ENST00000479625 ASB14A6NK59 587 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 PRR33A8MZF0 331 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 MYL3P08590 195 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 IFIT2P09913 472 aaKnown RBP11.58□□□□□ -0.56
GPNMB-211ENST00000479625 ALAS1P13196 640 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 IL9P15248 144 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 PURAQ00577 322 aaKnown RBP11.58□□□□□ -0.56
GPNMB-211ENST00000479625 CLASRPQ8N2M8 674 aaKnown RBP11.58□□□□□ -0.56
GPNMB-211ENST00000479625 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
GPNMB-211ENST00000479625 UIMC1Q96RL1 719 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 SEZ6LQ9BYH1 1024 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.56
GPNMB-211ENST00000479625 UBE2ZQ9H832 354 aaPredicted RBP11.58□□□□□ -0.56
GPNMB-211ENST00000479625 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
GPNMB-211ENST00000479625 ZNF318Q5VUA4 2279 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 TMEM232C9JQI7 657 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 IQCF3P0C7M6 154 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 BMP3P12645 472 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 DEFB103AP81534 67 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 UBE3CQ15386 1083 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 SBK1Q52WX2 424 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 PPP4R3BQ5MIZ7 849 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 KIAA1211Q6ZU35 1233 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 GMCL1P1Q8NEA9 526 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 PHOSPHO2Q8TCD6 241 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 TRERF1Q96PN7 1200 aa11.57□□□□□ -0.56
GPNMB-211ENST00000479625 EPB41L4AQ9HCS5 686 aaPredicted RBP11.57□□□□□ -0.56
GPNMB-211ENST00000479625 KIAA1217Q5T5P2 1943 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 PLIN4Q96Q06 1357 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 GSG1L2A8MUP6 293 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 SUPT20HL2P0C7V6 817 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 KCNA5P22460 613 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 SSTR3P32745 418 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-211ENST00000479625 RFC2P35250 354 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 STAT2P52630 851 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 WDR5P61964 334 aaKnown RBP11.56□□□□□ -0.56
GPNMB-211ENST00000479625 NHLH1Q02575 133 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 IKQ13123 557 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-211ENST00000479625 NBPF20Q3BBV1 942 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 IQSEC1Q6DN90 963 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 FAM178BQ8IXR5 827 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 GJD3Q8N144 294 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-211ENST00000479625 ANKS1AQ92625 1134 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 KIF1BPQ96EK5 621 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 HAUS7Q99871 368 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 VTA1Q9NP79 307 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 POLR3EQ9NVU0 708 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 MTMR4Q9NYA4 1195 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 Q9Y3F1 56 aa11.56□□□□□ -0.56
GPNMB-211ENST00000479625 RALGAPA2Q2PPJ7 1873 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 KIF28PB7ZC32 967 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 TTLL1O95922 423 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 ATP5JP18859 108 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 TCTN1Q2MV58 587 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 DUSP28Q4G0W2 176 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 HSP90AB4PQ58FF6 505 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 NSMFQ6X4W1 530 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 OR6J1Q8NGC5 347 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 MKL1Q969V6 931 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 SNX27Q96L92 541 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 STRBPQ96SI9 672 aaKnown RBP11.55□□□□□ -0.56
GPNMB-211ENST00000479625 MTG1Q9BT17 334 aaPredicted RBP11.55□□□□□ -0.56
GPNMB-211ENST00000479625 SUGCTQ9HAC7 445 aa11.55□□□□□ -0.56
GPNMB-211ENST00000479625 BAIAP3O94812 1187 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 KCNJ6P48051 423 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 CPT1AP50416 773 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 ALDH5A1P51649 535 aaPredicted RBP11.54□□□□□ -0.56
GPNMB-211ENST00000479625 CHMP4BP1P59074 171 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 MFSD10Q14728 455 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 GPNMBQ14956 572 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 LEXMQ3ZCV2 418 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 KCTD1Q719H9 257 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
GPNMB-211ENST00000479625 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
GPNMB-211ENST00000479625 RETREG2Q8NC44 543 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 MORC4Q8TE76 937 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 COPS5Q92905 334 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 FBXL18Q96ME1 805 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 WDR11Q9BZH6 1224 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 KMT2EQ8IZD2 1858 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 CFAP54Q96N23 3096 aa11.54□□□□□ -0.56
GPNMB-211ENST00000479625 MYH7BA7E2Y1 1941 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.53□□□□□ -0.56
GPNMB-211ENST00000479625 FDX1P10109 184 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 MCCP23508 829 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 TDO2P48775 406 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 CSPP1Q1MSJ5 1256 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 TKFCQ3LXA3 575 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 PTCRAQ6ISU1 281 aaPredicted RBP11.53□□□□□ -0.56
GPNMB-211ENST00000479625 FAM117BQ6P1L5 589 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 FAM160B2Q86V87 743 aa11.53□□□□□ -0.56
GPNMB-211ENST00000479625 SIRT2Q8IXJ6 389 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms