RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 AGBL1Q96MI9 1066 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 A1CFQ9NQ94 594 aaKnown RBP10.33□□□□□ -0.76
DDX56-211ENST00000479602 PRDM5Q9NQX1 630 aaPredicted RBP10.33□□□□□ -0.76
DDX56-211ENST00000479602 STARD7Q9NQZ5 370 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 PDRG1Q9NUG6 133 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 TMEM39AQ9NV64 488 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 STK36Q9NRP7 1315 aa10.33□□□□□ -0.76
DDX56-211ENST00000479602 MYO9BQ13459 2157 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.32□□□□□ -0.76
DDX56-211ENST00000479602 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.32□□□□□ -0.76
DDX56-211ENST00000479602 DHX16O60231 1041 aaKnown RBP10.32□□□□□ -0.76
DDX56-211ENST00000479602 PFKFB2O60825 505 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 PQBP1O60828 265 aaKnown RBP10.32□□□□□ -0.76
DDX56-211ENST00000479602 ASGR1P07306 291 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 IFNAR1P17181 557 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 TMEM240Q5SV17 173 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 ZNF697Q5TEC3 545 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 TMTC3Q6ZXV5 915 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.32□□□□□ -0.76
DDX56-211ENST00000479602 FAM126BQ8IXS8 530 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 ANKRD35Q8N283 1001 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 PCSK9Q8NBP7 692 aaKnown RBP10.32□□□□□ -0.76
DDX56-211ENST00000479602 BRF1Q92994 677 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 ZSCAN31Q96LW9 406 aaPredicted RBP10.32□□□□□ -0.76
DDX56-211ENST00000479602 FAM161BQ96MY7 647 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 ZKSCAN3Q9BRR0 538 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 UPF3BQ9BZI7 483 aaKnown RBP10.32□□□□□ -0.76
DDX56-211ENST00000479602 MAP3K20Q9NYL2 800 aaKnown RBP10.32□□□□□ -0.76
DDX56-211ENST00000479602 Q9Y3F1 56 aa10.32□□□□□ -0.76
DDX56-211ENST00000479602 KLF18A0A0U1RQI7 1052 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.31□□□□□ -0.76
DDX56-211ENST00000479602 DCDC2CA8MYV0 355 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 RAD21O60216 631 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
DDX56-211ENST00000479602 ICAM1P05362 532 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 RAG1P15918 1043 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 SMPD1P17405 629 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 PDIA3P30101 505 aaKnown RBP10.31□□□□□ -0.76
DDX56-211ENST00000479602 NEK4P51957 841 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 AK2P54819 239 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 FPGSQ05932 587 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 NTRK3Q16288 839 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 TMEM63BQ5T3F8 832 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 SYDE2Q5VT97 1194 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 PPP1R18Q6NYC8 613 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 GLT1D1Q96MS3 346 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■■■□□ 17
DDX56-211ENST00000479602 LLPHQ9BRT6 129 aaKnown RBP10.31□□□□□ -0.76
DDX56-211ENST00000479602 RNF26Q9BY78 433 aaPredicted RBP10.31□□□□□ -0.76
DDX56-211ENST00000479602 ACAD9Q9H845 621 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 FAM217BQ9NTX9 383 aaPredicted RBP10.31□□□□□ -0.76
DDX56-211ENST00000479602 CYP39A1Q9NYL5 469 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 ZHX1Q9UKY1 873 aaPredicted RBP10.31□□□□□ -0.76
DDX56-211ENST00000479602 BRPF3Q9ULD4 1205 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 PRR12Q9ULL5 1215 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 LIMCH1Q9UPQ0 1083 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 CNTNAP5Q8WYK1 1306 aa10.31□□□□□ -0.76
DDX56-211ENST00000479602 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
DDX56-211ENST00000479602 RBM47A0AV96 593 aaKnown RBP10.3□□□□□ -0.76
DDX56-211ENST00000479602 ASB14A6NK59 587 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 KLRF2D3W0D1 207 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 ZBTB5O15062 677 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 CDKL5O76039 1030 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 METAP2P50579 478 aaKnown RBP eCLIP10.3□□□□□ -0.76
DDX56-211ENST00000479602 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 RTN1Q16799 776 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 MUM1L1Q5H9M0 696 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 GNASQ5JWF2 1037 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 IQSEC1Q6DN90 963 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 CHST3Q7LGC8 479 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 GTF3C6Q969F1 213 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 TRERF1Q96PN7 1200 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 SEZ6LQ9BYH1 1024 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 PDGFCQ9NRA1 345 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 RNF146Q9NTX7 359 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 PLXNA1Q9UIW2 1896 aa10.3□□□□□ -0.76
DDX56-211ENST00000479602 MYH6P13533 1939 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 ESYT2A0FGR8 921 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 GOLGA8BA8MQT2 603 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 CYTH3O43739 400 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 CABYRO75952 493 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 C6orf222P0C671 652 aaPredicted RBP10.29□□□□□ -0.76
DDX56-211ENST00000479602 PTGS1P23219 599 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 FGD1P98174 961 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 TNFAIP2Q03169 654 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 CPLX2Q6PUV4 134 aaKnown RBP10.29□□□□□ -0.76
DDX56-211ENST00000479602 NFXL1Q6ZNB6 911 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 KCTD1Q719H9 257 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 RASGRP2Q7LDG7 609 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 MICU3Q86XE3 530 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 MYLIPQ8WY64 445 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 RNPC3Q96LT9 517 aaKnown RBP10.29□□□□□ -0.76
DDX56-211ENST00000479602 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
DDX56-211ENST00000479602 GLT8D2Q9H1C3 349 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 JMJD4Q9H9V9 463 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 GPHNQ9NQX3 736 aaPredicted RBP10.29□□□□□ -0.76
DDX56-211ENST00000479602 TPCN1Q9ULQ1 816 aa10.29□□□□□ -0.76
DDX56-211ENST00000479602 DDX49Q9Y6V7 483 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms