RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 GPHNQ9NQX3 736 aaPredicted RBP20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 TRMT13Q9NUP7 481 aaKnown RBP20.28■□□□□ 0.84
ECHDC1-216ENST00000479525 RBM47A0AV96 593 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 KLRF2D3W0D1 207 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 IFIT3O14879 490 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 SGSM2O43147 1006 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 ZEB2O60315 1214 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 TXNP10599 105 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 CYP2C9P11712 490 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 LY6KQ17RY6 165 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 FAM47CQ5HY64 1035 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 RUFY2Q8WXA3 655 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 SEMA6BQ9H3T3 888 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 HIPK3Q9H422 1215 aa20.27■□□□□ 0.84
ECHDC1-216ENST00000479525 OPLAHO14841 1288 aa20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 PBX2P40425 430 aa20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 ANTXR2P58335 489 aa20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 PURAQ00577 322 aaKnown RBP20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 TRDNQ13061 729 aa20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 ZNF365Q70YC5 407 aa20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 DNERQ8NFT8 737 aa20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 CDX2Q99626 313 aaPredicted RBP20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 MYL10Q9BUA6 226 aa20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 Q9Y3F1 56 aa20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 RBM8AQ9Y5S9 174 aaKnown RBP20.26■□□□□ 0.83
ECHDC1-216ENST00000479525 HOXA13P31271 388 aaPredicted RBP20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 SMAD3P84022 425 aaKnown RBP20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 PPIGQ13427 754 aaKnown RBP eCLIP20.25■□□□□ 0.838e-6■■■■□ 22.7
ECHDC1-216ENST00000479525 SCFD2Q8WU76 684 aa20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 PIGSQ96S52 555 aa20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 RMDN3Q96TC7 470 aa20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 WNT8AQ9H1J5 351 aa20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 TANC1Q9C0D5 1861 aa20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 PRUNE2Q8WUY3 3088 aa20.25■□□□□ 0.83
ECHDC1-216ENST00000479525 CABYRO75952 493 aa20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 NBPF20Q3BBV1 942 aa20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 RALYLQ86SE5 291 aaKnown RBP20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 TMEM199Q8N511 208 aa20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 NOC4LQ9BVI4 516 aaKnown RBP20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 ALDH8A1Q9H2A2 487 aaPredicted RBP20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 CXXC1Q9P0U4 656 aaPredicted RBP20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 MRPL11Q9Y3B7 192 aaKnown RBP20.24■□□□□ 0.83
ECHDC1-216ENST00000479525 PALM3A6NDB9 673 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 DNAJB2P25686 324 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 CPT1AP50416 773 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 GRM4Q14833 912 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 WTAPQ15007 396 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 ARHGEF16Q5VV41 709 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 OTOP2Q7RTS6 562 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 AFG1LQ8WV93 481 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 POLR3EQ9NVU0 708 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 PNMA2Q9UL42 364 aa20.23■□□□□ 0.83
ECHDC1-216ENST00000479525 CYTH3O43739 400 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 MYCLP12524 364 aaPredicted RBP20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 TTLL4Q14679 1199 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 TMEM67Q5HYA8 995 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 NCOA7Q8NI08 942 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 IL31RAQ8NI17 732 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 MPHOSPH6Q99547 160 aaKnown RBP20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 MTG1Q9BT17 334 aaPredicted RBP20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 AMNQ9BXJ7 453 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 PCDHA1Q9Y5I3 950 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 MYO9BQ13459 2157 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 TET1Q8NFU7 2136 aa20.22■□□□□ 0.83
ECHDC1-216ENST00000479525 CCDC62Q6P9F0 684 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 DEFB128Q7Z7B8 93 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 MB21D2Q8IYB1 491 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 NSUN6Q8TEA1 469 aaKnown RBP20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 IL23AQ9NPF7 189 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 PXMP2Q9NR77 195 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 PTPRSQ13332 1948 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 A0A0C4DFX4 3053 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 LOC102724159A0A0B4J2E5 919 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 ERICH2A1L162 156 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 ZBTB5O15062 677 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 RXRAP19793 462 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 ARHGAP1Q07960 439 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 GRIN2CQ14957 1233 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 PWP2Q15269 919 aaKnown RBP20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 FCHSD1Q86WN1 690 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 MCF2L2Q86YR7 1114 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 GPKOWQ92917 476 aaPredicted RBP eCLIP20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 MAP4K1Q92918 833 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 VWCEQ96DN2 955 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 MTMR8Q96EF0 704 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 LRRC2Q9BYS8 371 aa20.21■□□□□ 0.83
ECHDC1-216ENST00000479525 NR3C2P08235 984 aa20.2■□□□□ 0.82
ECHDC1-216ENST00000479525 MMP3P08254 477 aa20.2■□□□□ 0.82
ECHDC1-216ENST00000479525 NT5C2P49902 561 aa20.2■□□□□ 0.82
ECHDC1-216ENST00000479525 STXBP2Q15833 593 aa20.2■□□□□ 0.82
ECHDC1-216ENST00000479525 CMTR1Q8N1G2 835 aaKnown RBP20.2■□□□□ 0.82
ECHDC1-216ENST00000479525 PBX4Q9BYU1 374 aa20.2■□□□□ 0.82
ECHDC1-216ENST00000479525 LSG1Q9H089 658 aaKnown RBP20.2■□□□□ 0.82
ECHDC1-216ENST00000479525 A6NJR5 290 aa20.19■□□□□ 0.82
ECHDC1-216ENST00000479525 DLL1O00548 723 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms