RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 GNL2Q13823 731 aaKnown RBP14.96□□□□□ -0.01
CHD3-210ENST00000479080 GRB14Q14449 540 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 C4orf32Q8N8J7 132 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.01
CHD3-210ENST00000479080 MBOAT7Q96N66 472 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 MMP19Q99542 508 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 PDCD2LQ9BRP1 358 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 GDPD2Q9HCC8 539 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 PXMP2Q9NR77 195 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 MAP3K20Q9NYL2 800 aaKnown RBP14.96□□□□□ -0.01
CHD3-210ENST00000479080 PFASO15067 1338 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 SLC37A4O43826 429 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 FOSP01100 380 aaPredicted RBP14.95□□□□□ -0.02
CHD3-210ENST00000479080 ATP2B1P20020 1258 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 NASPP49321 788 aaPredicted RBP14.95□□□□□ -0.02
CHD3-210ENST00000479080 CCNA1P78396 465 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 MRPS9P82933 396 aaKnown RBP14.95□□□□□ -0.02
CHD3-210ENST00000479080 ZNF792Q3KQV3 632 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 TTC38Q5R3I4 469 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 MORN1Q5T089 497 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 PLEKHH3Q7Z736 793 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 NEK8Q86SG6 692 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 ANKRD35Q8N283 1001 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 USP6NLQ92738 828 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 LENG9Q96B70 501 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 MAF1Q9H063 256 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 TMEM60Q9H2L4 133 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 MYH7BA7E2Y1 1941 aa14.95□□□□□ -0.02
CHD3-210ENST00000479080 IGLV3-22A0A075B6J6 115 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 SPDYE3A6NKU9 549 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 CYP3A4P08684 503 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 EIF2AK2P19525 551 aaKnown RBP14.94□□□□□ -0.02
CHD3-210ENST00000479080 EDNRBP24530 442 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 ADORA2AP29274 412 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 MAPK4P31152 587 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 CIITAP33076 1130 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 TRAPPC10P48553 1259 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 ALDH5A1P51649 535 aaPredicted RBP14.94□□□□□ -0.02
CHD3-210ENST00000479080 PGM5Q15124 567 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 SF3A1Q15459 793 aaKnown RBP14.94□□□□□ -0.02
CHD3-210ENST00000479080 ZNF174Q15697 407 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 LETM2Q2VYF4 491 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 RILPL1Q5EBL4 403 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 WDR78Q5VTH9 848 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 ANO1Q5XXA6 986 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 CYP2W1Q8TAV3 490 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 RTEL1Q9NZ71 1219 aa14.94□□□□□ -0.02
CHD3-210ENST00000479080 CYP3A7-CYP3A51PA0A087WV96 503 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 FAM86B1E9PN63 330 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 POTEB2H3BUK9 544 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 RGS20O76081 388 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 FAM86B2P0C5J1 330 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 FCER1AP12319 257 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 CYP3A7P24462 503 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 CEBPZQ03701 1054 aaKnown RBP14.93□□□□□ -0.02
CHD3-210ENST00000479080 MCTP2Q6DN12 878 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 ABRAQ8N0Z2 381 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 LINC00301Q8NCQ3 95 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 NPLOC4Q8TAT6 608 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 LEO1Q8WVC0 666 aaPredicted RBP14.93□□□□□ -0.02
CHD3-210ENST00000479080 TRIM47Q96LD4 638 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 RMDN3Q96TC7 470 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 GJD2Q9UKL4 321 aa14.93□□□□□ -0.02
CHD3-210ENST00000479080 SLC15A5A6NIM6 579 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 FIBPO43427 364 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 IGHA2P01877 340 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 ITGB5P18084 799 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 LACTBP83111 547 aaPredicted RBP14.92□□□□□ -0.02
CHD3-210ENST00000479080 GRIN1Q05586 938 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 SEMA3FQ13275 785 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 KCTD2Q14681 263 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 IL17AQ16552 155 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 MORC4Q8TE76 937 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 SAGE1Q9NXZ1 904 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 RCOR1Q9UKL0 485 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 NOL7Q9UMY1 257 aaKnown RBP14.92□□□□□ -0.02
CHD3-210ENST00000479080 UBIAD1Q9Y5Z9 338 aa14.92□□□□□ -0.02
CHD3-210ENST00000479080 GPR25O00155 361 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 YEATS4O95619 227 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 NR3C2P08235 984 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 MCM7P33993 719 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 USP11P51784 963 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 KRT85P78386 507 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 ATP2C1P98194 919 aaPredicted RBP14.91□□□□□ -0.02
CHD3-210ENST00000479080 PCNX4Q63HM2 1172 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 PPP4R3AQ6IN85 833 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 MOXD1Q6UVY6 613 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 VSIG10LQ86VR7 867 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 TMEM87AQ8NBN3 555 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 DNERQ8NFT8 737 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 HAS1Q92839 578 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 GJA10Q969M2 543 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 ZNF396Q96N95 335 aaPredicted RBP14.91□□□□□ -0.02
CHD3-210ENST00000479080 WBP1LQ9NX94 342 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 TSKSQ9UJT2 592 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 MORC2Q9Y6X9 1032 aaPredicted RBP14.91□□□□□ -0.02
CHD3-210ENST00000479080 PCNTO95613 3336 aa14.91□□□□□ -0.02
CHD3-210ENST00000479080 STRNO43815 780 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms